| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1181 |
|---|
| Symbol | |
|---|
| ID | 6122859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1292682 |
|---|
| End bp | 1293455 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641637755 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001764478 |
|---|
| Protein GI | 170732531 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0132418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.222462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTGC TCGAACTCGA CGACCTCTGC GTCGCCTACG ACACGCCGCA CGGCCGCCGC
ACCGTGGTCG ACGGCCTGAG CCTCGCGCTG CCGCGCGGCG ACATCGGCTG CCTGCTCGGC
GCGTCCGGCT GCGGCAAGAC CACCGTGCTG CGCGCGATCG CCGGCTTCGA ACCCGTGCGC
ATGGGGCGCA TCGTGCTGGA CGGCACGCCG GTCGCGGCGC CGTCGCTCGA CGTGCCGCCC
GAGCGGCGGC GCATCGGCAT GATGTTCCAG GATTACGCGC TGTTTCCGCA CCTGAGCGCG
GCCGACAACG TCGCGTTCGG CCTGCGGCGC ATGCCGAAGG GCGAACGGCG CCTGCGCGTC
GCGGAGCTGC TCGACCTCGT CGGCCTCGCC GATTCCGGCG ACGCGTATCC GCACGAACTG
TCGGGCGGCC AGCAGCAGCG CGTCGCCCTC GCACGCGCCC TCGCGCCATC GCCGGAATTG
CTGCTGCTCG ATGAGCCGTT CTCGAATCTC GACGTCGATA CGCGCGAGCG GCTTGCGTTC
GAGCTACGCG ACATCCTGAA GCACACGGGC CACACCGCGA TCCTCGTCAC GCACAATCAG
GCGGAAGCGT TCGCGATCGC CGACCGGATC GGCGTGATGA AGGACGGCCG GCTCGCGCAA
TGGGATACGC CGTATGCGCT GCACCATCAT CCGGCCAGCC CGTTCGTCGC GGATTTCGTG
CGCCGCGACG CGCTGGCCGA CGAACGCGCG CGCGCCCTGG CGCGCGGCCG CTGA
|
|---|
| Protein sequence | MNLLELDDLC VAYDTPHGRR TVVDGLSLAL PRGDIGCLLG ASGCGKTTVL RAIAGFEPVR
MGRIVLDGTP VAAPSLDVPP ERRRIGMMFQ DYALFPHLSA ADNVAFGLRR MPKGERRLRV
AELLDLVGLA DSGDAYPHEL SGGQQQRVAL ARALAPSPEL LLLDEPFSNL DVDTRERLAF
ELRDILKHTG HTAILVTHNQ AEAFAIADRI GVMKDGRLAQ WDTPYALHHH PASPFVADFV
RRDALADERA RALARGR
|
|---|
| |