Gene Bcenmc03_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1178 
Symbol 
ID6122856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1290718 
End bp1291173 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID641637752 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001764475 
Protein GI170732528 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000716661 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.224139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA GCAGCCGGTT CGCGTTTGCC GTTCACGTGC TTGCCTTGCT GTCGATGCAG 
GAAGGCATGC CGTTGTCGTC CGACATCATC GCGGGCAGCG TGAATACGAA TCCGGCGCTG
ATTCGCCGGT TGCTGTCGAT GCTGGCGGCC GCGGGCCTGA CCACGTCGCA GCTCGGCGCG
GGCGGCGGTG CGCTGCTGGC GCGCGAGCCC GGTGAGATCA CGCTGCTCGA CGTGTATCGC
GCGGTCGACG ATGCGCAACT GTTCGCGCTG CACCGCGAGG CGCCGAATCC GGCGTGTCTC
GTCGGGCGGC ACATCCAGGG CGTGCTGACC GGCTATATCG GCGACGCGCA GCGCGCGATG
GAGGCTTCGC TCGCCACGCG CACGTTGGTC GACGTGACAG CCGACATGCT GGATCGGGAG
CAGCGCACGC AACGGGCGGC GCGCGCCGGC GGGTGA
 
Protein sequence
MNTSSRFAFA VHVLALLSMQ EGMPLSSDII AGSVNTNPAL IRRLLSMLAA AGLTTSQLGA 
GGGALLAREP GEITLLDVYR AVDDAQLFAL HREAPNPACL VGRHIQGVLT GYIGDAQRAM
EASLATRTLV DVTADMLDRE QRTQRAARAG G