| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1175 |
|---|
| Symbol | |
|---|
| ID | 6122853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1288209 |
|---|
| End bp | 1289402 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641637749 |
|---|
| Product | Rh family protein/ammonium transporter |
|---|
| Protein accession | YP_001764472 |
|---|
| Protein GI | 170732525 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.103344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.265328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGTC TGAAATCCGG CGTCGACACA CTGTTCCTGT TGATCGGCGC CGTCATGGTG
CTCGCGATGC ACGCGGGCTT CGCGTTTCTC GAGCTCGGCA CGGTCCGCAA GAAGAACCAG
GTCAACGCGC TCGTGAAGAT ACTCGTCGAT TTCTCGGTGT CGACGCTCGC GTACTTCTTC
ATCGGCTACA CGATCGCGTA CGGCGTCGAA TTCTTCGACG ACATCGGCAC GCTGTCGCAG
CACAACGGCT ACGCGCTCGT GCGCTTCTTT TTCCTACTGA CGTTCGCGGC GGCGATCCCG
GCGATCGTGT CCGGCGGCAT CGCCGAGCGC GCGAAGTTCA ACCCGCAGCT CGTCGCGACG
CTGATCATCG TCGGCTTCAT CTATCCGTTC TTCGAAGGGA TCGCCTGGAA CGAGCGCTTC
GGCGTGCAGG CCTGGCTCGC GCACGCGTTC GGCGCGCCGT TCCACGACTT CGCGGGCTCG
GTCGTCGTGC ACGCGTTCGG CGGCTGGGTC GCGCTGCCGG CCGTGCTGCT GCTCGGCGCG
CGCCACGGCC GCTATGCGAA GGACGGCCGG ATCGCCGCGC ACCCGCCGTC GAACATCCCG
TTCCTCGCGC TCGGCGCGTG GGTGCTCGCG GTCGGCTGGT TCGGCTTCAA CGTGATGAGC
GCGCAGACGC TCGACAAGAT CAGCGGCCTC GTCGCGATGA ATTCGCTGAT GGCGATGGTC
GGCGGCACGC TCGCCGCGTG GATGGCCGGC CGCAACGACC CGGGCTTCAC GTACAACGGG
CCGCTCGCGG GCCTCGTCGC GGTATGCGCC GGCTCCGACG TGATGCACCC GATCGGCGCG
CTCGTCACGG GCGCCGCGGC CGGCGCGCTG TTCGTCGCGA TGTTCACCTG CGTGCAGAAC
CGCTGGCGCA TCGACGACGT GCTCGGCGTC TGGCCGCTGC ACGGGATGTG CGGCGCGCTC
GGCGGCCTCG CGGCCGGCGT GTTCGGGCTG CCGGCGCTCG GCGGCCTCGG CGGCGTGTCG
TTCCTGTCGC AGCTCGTCGG CACGCTCGGC GGCATCGCGA TCGCGACCGC GGGCGGCGCG
CTCGTCTACG GCGCGCTGAA GGCGACCGTC GGCCTGCGTC TCGATCGGGA AGCCGAATTC
GACGGCGCCG ACCTGTCGAT CCACCGCATC TCGGCCACGC CCGAGCGCGA TTGA
|
|---|
| Protein sequence | MDGLKSGVDT LFLLIGAVMV LAMHAGFAFL ELGTVRKKNQ VNALVKILVD FSVSTLAYFF
IGYTIAYGVE FFDDIGTLSQ HNGYALVRFF FLLTFAAAIP AIVSGGIAER AKFNPQLVAT
LIIVGFIYPF FEGIAWNERF GVQAWLAHAF GAPFHDFAGS VVVHAFGGWV ALPAVLLLGA
RHGRYAKDGR IAAHPPSNIP FLALGAWVLA VGWFGFNVMS AQTLDKISGL VAMNSLMAMV
GGTLAAWMAG RNDPGFTYNG PLAGLVAVCA GSDVMHPIGA LVTGAAAGAL FVAMFTCVQN
RWRIDDVLGV WPLHGMCGAL GGLAAGVFGL PALGGLGGVS FLSQLVGTLG GIAIATAGGA
LVYGALKATV GLRLDREAEF DGADLSIHRI SATPERD
|
|---|
| |