| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1172 |
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| Symbol | |
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| ID | 6122850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1282994 |
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| End bp | 1284358 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641637746 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001764469 |
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| Protein GI | 170732522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.118061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACG AACAAAAGCC CACGCCCCCT TCGAAAGACT CCGCGCCCGC CGCTGCACGG
CGCCCGCGCC GCACGCTTCT GATCGGCACC GTCGCGGTCG TCGTCATCGG CGGCCTGCTG
TGGTGGCATC CGTGGAACCG CACGCCCGCG ACAGGCAGTT CGGCGCAAGG CGCGGGCGCC
AGCGCGGCCG CAGGCAGCCA TCGCGGCCGC GGCGGCCCCG CTGCAATGGC GAACGTTCCG
CAGCCGGTGC AGGTCGCCCC CGTGACGCAG GGCGAGATGC CGATCGTGCT GTCCGCGCTC
GGCACCGTCA CGCCGCTCGC GAACGTAACG GTCAAGACGC AGCTGTCGGG CTACCTGCAG
TCGGTGTCGT TCCAGGAAGG CCAGATCGTC AAGAAAGGCG ACGTGCTCGC GCAGATCGAC
CCGCGCCCGT ACCAGGTCGC GCTCGAGAAC GCCGAAGGCA CGCATGCGCG CGACGCGGCG
CTGCTCGCGA CGGCCCGCCT CGACCTGAAG CGCTACCAGA CGCTGCTGTC GCAGGACTCG
ATCGCGTCGC AAACCGTCGA TACGCAGGCA TCGCTCGTCA AGCAGTACGA AGGCGCGGTG
AAGACCGACC AGGCCGCGAT CGATTCCGCG AAACTCAATC TCACCTACGC GCGCATCACG
GCGCCGGTCT CCGGCCGCGT CGGCCTGCGC CAGGTCGACC CCGGCAACTA CGTGACGCCG
GGCGACACCA ACGGCATCGT CGTGATCACG CAGTTGCAGC CGATGAGCGT GATCTTCACG
ACGTCGGAAG ACAACCTGCC GCAGATCCTC AAGCAGGTGA ACGCCGGCCA GAAGCTGTCG
GTCACCGCCT ACAACCGCAA CAACACCGTG CCGCTCGAAA CGGGCTCGCT CGCGACGCTC
GACAACCAGA TCGACACGAG CACCGGCACG GTCAAGCTGC GCGCGAATTT CGATAACAAG
GAAGGCATGC TGTTCCCGAA TCAGTTCGTG AACACGCGGC TGCTCGTCGA CGTGATGCGC
AACGCGACGA TCGTGCCGAC CTCCGCCGTG CTGACGGGCT CGATCGGCCA GTTCGTCTAT
GTCGTGAAAC CCGACAATAC GGTGACGGTG CGCAAGGTCA CGGTCGGCCC GGTCGACGGC
GAACGCACGA GCATCGTCAG CGGCGTGACG CTCGGCGAGC GCGTGGTGAC CGACGGCTCG
GACCGTCTGC GCGAAGGCTC GAAGATCTCG ATTCCGGCCG ACAAGCCGAA GGACGCATCG
GGCGCGCACG GCGCACGGGC CGCATCGGCT GCGTCCGGTG CCGGCGGCCA TCGCGGCGGA
CACCGGCACG GCGCGTCGCA AGCCGCGGCC CCCGCGGCCC AGTAA
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| Protein sequence | MDNEQKPTPP SKDSAPAAAR RPRRTLLIGT VAVVVIGGLL WWHPWNRTPA TGSSAQGAGA
SAAAGSHRGR GGPAAMANVP QPVQVAPVTQ GEMPIVLSAL GTVTPLANVT VKTQLSGYLQ
SVSFQEGQIV KKGDVLAQID PRPYQVALEN AEGTHARDAA LLATARLDLK RYQTLLSQDS
IASQTVDTQA SLVKQYEGAV KTDQAAIDSA KLNLTYARIT APVSGRVGLR QVDPGNYVTP
GDTNGIVVIT QLQPMSVIFT TSEDNLPQIL KQVNAGQKLS VTAYNRNNTV PLETGSLATL
DNQIDTSTGT VKLRANFDNK EGMLFPNQFV NTRLLVDVMR NATIVPTSAV LTGSIGQFVY
VVKPDNTVTV RKVTVGPVDG ERTSIVSGVT LGERVVTDGS DRLREGSKIS IPADKPKDAS
GAHGARAASA ASGAGGHRGG HRHGASQAAA PAAQ
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