Gene Bcenmc03_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1167 
Symbol 
ID6122845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1273452 
End bp1274081 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID641637741 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001764464 
Protein GI170732517 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0563163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA AGGTACTGCT GATTGGCGCG ACCGGCCGGA CGGGCCAGGC CTGCGCGGAT 
CTGCTGCTCA AGCAGCCGGA GTTCGAGGTC ACGGCGCTCG TGCGCCGGCA CGGCTATGCG
CTGGCGGGCG CACGGGTCGT CGAGGCCGAT CTGACGAACG ATTTCTCGCA CGCGTTCCAG
GGCATCACGC ATGTGATCTA CACGGCCGGC TCGGCGGAAT CGGACGGTGC GACCGAAGAG
GAGCAGGTCG ACCGCGACGC GGTCGCCCGC GCGGCCGACT ACGCGCTGGC CTACAACACG
CAGAAGCTCG TGGTGGTCAG CTCGCTGTCC GCGTACCGGC CCGAGCAGGG CCCGGACGCG
CTGCACCACT ATTCGCAGAT GAAGCGCGAA GGCGACGAGC GCGTGATCGC GTCGGGCGTC
GACTACGTGA TCCTGCGTCC GGGCCCGCTC ACGGACGATC CGGGCGTCGG CAAGATCGCG
CTGACCGACA GGTGGCTCGA GCCCGCGCCG CCCGTCTCGC GCCAGGATGT TGCATGGGCC
GCGATCGAGG CGATCAAGCT CGGCATCTCG CGCAAGATCG TCGGCTTCGT CGGCGGCAGC
GTGCCGATCG AACAGGCATT GCGCGCGTAA
 
Protein sequence
MTTKVLLIGA TGRTGQACAD LLLKQPEFEV TALVRRHGYA LAGARVVEAD LTNDFSHAFQ 
GITHVIYTAG SAESDGATEE EQVDRDAVAR AADYALAYNT QKLVVVSSLS AYRPEQGPDA
LHHYSQMKRE GDERVIASGV DYVILRPGPL TDDPGVGKIA LTDRWLEPAP PVSRQDVAWA
AIEAIKLGIS RKIVGFVGGS VPIEQALRA