Gene Bcenmc03_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1164 
Symbol 
ID6122842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1269256 
End bp1270764 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content70% 
IMG OID641637738 
Productputative signal transduction protein 
Protein accessionYP_001764461 
Protein GI170732514 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.115265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCA CCGAATACCT GCCCCGCACC GCGCTGCTCG ACAAGCTGTG GGCCCGGATG 
AACGAACGGG GCGATTTCCC GCTGCTGTCG GAATCGCTGC GCGCGACGAT GGCCGCGATG
AAGAACGACG ACCTCGACTT CACCGCGCTC GTGCGCGTCG TGCTGTCGGA CTTCGCGCTC
ACGCAGAAAG TGCTGCGGCT CGCGAACTCC GCGATGTACA TGGCGTTCGG CGGCAACATC
ACCACCGTGA CCCGCGCACT GATGGTGCTC GGCATGGACG CCGTCGGCCA TCTCGTGGTC
GGGTTGAAGC TCGTCGACCA TTTCCATCAG AGCACGCCGC GGCGCATCGA CGCGAAGCTG
GCGCTGAACC GCGCGCTGCT GTCCGGTTGC GTCGCGCGCA AGCTCACCGA GCGCGCCGAA
CTGCGCTCGG GCGAGGAAGC CGTCGTCTGC ACGCTGATGC GCCAGGTCGG CAAGCTGCTG
GTGGTCTGCT ATCTCGACAG CGAATGGGAT CACATCCGCC GCCGCGCGGC CGAGTTGAAC
GGCGACGAAT CGGCCGCCTG CGTCGACGTG CTCGGCGTCG GCTTCGACGA GATCGGTCTC
GAAGCCGCCG CGCGCTGGCG GCTGCCCGAC GTGATCCGCG CGGGGATGGC CAACGGAGAT
CACGCGGCGC ACGCCGACGC GTTCGGCGAC GACGGCGACG CCCGCCACGC AGACCCGGCG
GCAGACGGCG GCCCGGCCGA CCGCATCCGC TGGCTGCGCG CGGTGAGCCG CTGCTCGACC
GACGTCGCCG GCGCGCTCGT CATGCCCGCG AGCCCGCAGC GCGACGCGCG CATCGCGACG
CTCGCGCAGC ACTACGGCGC GGAGCTCGAC ATGGAATCCG ACGCGCTCGT CGAGATCGCC
GAGCGGCTCG CGCGCGAGGA AGCGAGCGAC ACCGTGATGC GCGAGATCGT CGAGCTGCGC
GCGAACGCCG ATGCGATCGC GCGCGCGCAG GCCGCGCCCG AGGCCTGCCT CGAAGCCGGT
CTGGCCGACC TGCGCGCGCT GCCATCCGAG CACGTGCTGA CGCCGGTGCT CGCGCTCGCG
TCGGAAAGCC TGCTGGCCGG TCTCGCCTTC ACGCGCACCG TGATGTTCGT GCGTCACGAC
GACGGCACGT TCGCCGCGCG CCTGGGCTTC GGCCCCGGCG TCGATACGGC GCTCGACCGG
CTGCGCTTCG ACGAACGCTT CGAGCCGGAC GTGTTTCATC TCGCGATCTC GAACTCGGTG
GGCATCTTCA TCGAGCAAGC GCAGGAGCCG AAGATGATGA AGCGCCTGCC CGCGTGGTAT
CTCGACGCGT TCGACGACAC GCGCGCATTC GTGCTGTTGC CCGTGCGCGT CGGCACGACG
AGCGTCGCGC TGCTGTACGG CGACTGGGCC GGCGCGCAAC CCGCACGCAA GATCTCGCAG
CAGGAGATGG CCGTGCTCAA CGAACTCGCG CGCGAGCTGG GGCGGTTCTT TCCCGCTCAG
CCCGGCTGA
 
Protein sequence
MSTTEYLPRT ALLDKLWARM NERGDFPLLS ESLRATMAAM KNDDLDFTAL VRVVLSDFAL 
TQKVLRLANS AMYMAFGGNI TTVTRALMVL GMDAVGHLVV GLKLVDHFHQ STPRRIDAKL
ALNRALLSGC VARKLTERAE LRSGEEAVVC TLMRQVGKLL VVCYLDSEWD HIRRRAAELN
GDESAACVDV LGVGFDEIGL EAAARWRLPD VIRAGMANGD HAAHADAFGD DGDARHADPA
ADGGPADRIR WLRAVSRCST DVAGALVMPA SPQRDARIAT LAQHYGAELD MESDALVEIA
ERLAREEASD TVMREIVELR ANADAIARAQ AAPEACLEAG LADLRALPSE HVLTPVLALA
SESLLAGLAF TRTVMFVRHD DGTFAARLGF GPGVDTALDR LRFDERFEPD VFHLAISNSV
GIFIEQAQEP KMMKRLPAWY LDAFDDTRAF VLLPVRVGTT SVALLYGDWA GAQPARKISQ
QEMAVLNELA RELGRFFPAQ PG