| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1130 |
|---|
| Symbol | |
|---|
| ID | 6122808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1230132 |
|---|
| End bp | 1231001 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641637704 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_001764427 |
|---|
| Protein GI | 170732480 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3336] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.581641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCC TGTACTGGCT CGATCCGTGG GAACCGTCGC CCACCGTGGT CGTCGCGGTG
CTGACGGCCG CCGTGCTGTT CGCACGCGGC GTGAAGAAGG CGAAGGTGTC GCCGCTGCGG
CAGTTCTCGT TCTGGTTCGG GCTGACGGCG CTCTACATCG CGCTGCATAC GCGGCTCGAC
TATTTCTTCG AGCACGAATT CTTCATGCAC CGCGCGCAGC ACCTCGTGCT GCATCACCTC
GGGCCGTTCT TCATCGCACT GTCCTATCCG GGCGCGGCGA TCCGCGCGGG CATTCCGTTC
AGCTGGCGGC AGCGCTTCGT GCGCCCCGCG CTCGCGTGGG CGCCGGTGCG CGCGACCCTC
GACGTGGTAT TTCATCCGGT CGTCGCGGTC GTGCTGTTCG TCGGGCTGAT CTATTTCTGG
CTGCTGTCGC CGATCCACTT CATCGCGATG CTCGACTGGC GTCTCTATCG CGTGATGAAC
TGGAGCATGG TGATCGACGG GCTGCTGTTC TGGTGGCTCG TCGTCGATCC GCGTCCCGCG
CCGCCCGCGC GGCTGTCGCC GGGCCGCCGG ATTCTGATCG TCGTCGCGGC GATCCCGCCG
CAGATCGCGC TCGGCGCGCT GATCTTCTTC ACGCCGCACG AGCTGTATCC GATCTACTCG
ATCTGCGGCC GCGCGTTCAC GTGGCTGAGC CCGCTGCGCG ACCAGCAGAT CGGCGGCCTG
CTGCTGTGGA TTCCCGGCTC GATGATGAGC GTGATCGGCG CGCTGATCGC GCTGCGGCAC
TGGCTGCGGT TGTCCGCCCG CGGGCGCCTG ATCGGCGAGC GGGCCACGCA GCGCACGGAC
GAGCCGCCGG TCGCACGCGC CGCGCACTGA
|
|---|
| Protein sequence | MNLLYWLDPW EPSPTVVVAV LTAAVLFARG VKKAKVSPLR QFSFWFGLTA LYIALHTRLD
YFFEHEFFMH RAQHLVLHHL GPFFIALSYP GAAIRAGIPF SWRQRFVRPA LAWAPVRATL
DVVFHPVVAV VLFVGLIYFW LLSPIHFIAM LDWRLYRVMN WSMVIDGLLF WWLVVDPRPA
PPARLSPGRR ILIVVAAIPP QIALGALIFF TPHELYPIYS ICGRAFTWLS PLRDQQIGGL
LLWIPGSMMS VIGALIALRH WLRLSARGRL IGERATQRTD EPPVARAAH
|
|---|
| |