Gene Bcenmc03_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1126 
Symbol 
ID6122804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1226968 
End bp1227471 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID641637700 
Productputative GAF sensor protein 
Protein accessionYP_001764423 
Protein GI170732476 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00168904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGC TGTCCAACGA CCCTACCGCC TCCAAGGCCG ATCAATACGC GACGCTCGTC 
GAGCAGGCAC GTTCGCTCGT CGAATCCGAA CGCGACCTGA CCGCGAACGC GGCGAATTTC
TCCGCGCTCG TCTATCACTC GCTCGATCGC CTGAACTGGG CCGGCTTCTA CTTCTTCGAC
GGCACCGAGC TCGTGGTCGG GCCGTTCCAG GGCAAGCCCG CGTGCGTGCG GATCGCGCTC
GGCAAGGGCG TGTGCGGCAC GGCCGCGCAG ACCCGCGAGA CGCAGGTCGT GCGCGACGTG
CACGACTTCC CCGGCCATAT CGCGTGCGAT GCGGCGTCGG AATCGGAAAT CGTCGTGCCG
CTGGTGGCCG ACGACGGTAC GCTGATCGGC GTGTGGGACG TCGACAGCCC GGTCGCCGCG
CGCTTCGACG ACGAAGATCG CACAGGGATG GAGGCGCTGT GCCGCGTGTT CGTCGAACAC
GCGTGGCAGA AGGCGCGCGG TTAA
 
Protein sequence
MFTLSNDPTA SKADQYATLV EQARSLVESE RDLTANAANF SALVYHSLDR LNWAGFYFFD 
GTELVVGPFQ GKPACVRIAL GKGVCGTAAQ TRETQVVRDV HDFPGHIACD AASESEIVVP
LVADDGTLIG VWDVDSPVAA RFDDEDRTGM EALCRVFVEH AWQKARG