Gene Bcenmc03_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1123 
Symbol 
ID6122801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1225036 
End bp1225701 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID641637697 
ProductXRE family transcriptional regulator 
Protein accessionYP_001764420 
Protein GI170732473 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0106313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGA CACCGAATTC CAGTTTGCTG GAAAATAAAT CCATCATGAA AGAATCCTCG 
ATCACCGTGG CCGACGACAC CGGCATCAAC GAGCGCATTG CCCGGCGCGT GCGTGACCTG
CGCACCGTTC GAGGCTACAC GCTCGACGCG CTGGCCGCGC GTTCTGGCGT CAGCCGTTCG
ATGATCTCGC TCATCGAACG CGCATCGGCC AGTCCGACGG CCATCGTGCT CGACAAGCTC
GCGGCGGGGC TAGGCGTATC GCTGGCCGCG CTGTTCGGCG GCGACCGGGG CGACGCGCCC
GCGCAGCCGC TCGCACGGCG CGCGCAGCAG GCCGAATGGC GCGATCCGGC ATCCGGCTAT
GTGCGGCGCA ACCTGTCGCC GGCCGGCTGG CCATCGCCGA TCCAGCTCGT CGAGGTCGAC
TTCCCGCCCG GCGCGCGCGT CGCGTACGAC AGCGGCGGGC GCGAAAGCGC ACCGCACCAG
CAGGTGTGGA TCATCAGCGG CCGCGTGGAC GTTACGTTGG GCGATACGCT TCATGAACTT
CACGAAGGAG ACTGCCTGGC CATGCGACTC GACCAGCCGC TGATCTTCAG CAATCCGTCG
TCGCATGCCG CGCGCTATGT CGTCGCGATC TGCGATGTAT CCGCCGCCGG CGTGCGCAGC
GCGTGA
 
Protein sequence
MSLTPNSSLL ENKSIMKESS ITVADDTGIN ERIARRVRDL RTVRGYTLDA LAARSGVSRS 
MISLIERASA SPTAIVLDKL AAGLGVSLAA LFGGDRGDAP AQPLARRAQQ AEWRDPASGY
VRRNLSPAGW PSPIQLVEVD FPPGARVAYD SGGRESAPHQ QVWIISGRVD VTLGDTLHEL
HEGDCLAMRL DQPLIFSNPS SHAARYVVAI CDVSAAGVRS A