Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1110 |
Symbol | |
ID | 6122789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1215312 |
End bp | 1216850 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641637685 |
Product | integrase catalytic region |
Protein accession | YP_001764408 |
Protein GI | 170732461 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATTCAT ACGAAGACCG CGTTCGGGCG GTCGAGCTGT ACCTGAAGCT CGGGAAGCGC GTCAAGGCAA CAATCCGCCA GCTGGGTTAC CCCACGAAGA ATTCTCTCAA AGCATGGTGT GCGGAATTCG AGAGCAGTGG CGATCTGCAG AAGGAGTATG TCCGCGTAAA TCCGAAGTAC TCAGAGGAGC AGAAGAACCT GGCACTCGAG CATTACGTCA ATCACGGGCA GTGCCTCAGC TTCACCCTCC GGGCATTAGG CTATCCCTGT CGCCAGATAC TGACGGCGTG GGTTCGCGAG CGCTATCCAG AAACCAGGAA ATACGTGGTT GGCAAACGAG GGCGGCCGGC CGCGTCATTG CCATCCAGGC AAGCCGCAGT GTACGAACTG TGCACACGGC AAGGAAGTGC GGAGGCGGTG GCGCGAGCGC TGGACGTCGA CAGGGTGACG CTGTACAACT GGAAAAACCA GTTACTCGGG CGAGAGGCCC CTGCATCCAT GAAGCGCGAC AAGAGATCAC CCGCAGAGAC GGATCGGGAC GAACTGGAGC GGCAGGTCGA AGAGCTTCGG CGCGACATTC GCAATCTGCA GCTTGAACAC GACCTGTTGA AGAAGGCGAA TGAACTCGTA AAAAAAGACC TGGGCGTCGA CCTGCCACTC CTGAGCAACC GGGAGAAGAC GACGCTGGTT GACGCCCTGA GAGAAGAATA CGGTTTGGCT GAGCTGCTTG CGCGGTTGGA CCTGGCGCGC AGCTCCTATT TCTACCATCG GTCGTCCATA CGGGCTGCCG ACAAATACGC AGAGGTCCGT TGTACCGTTG CAGAGATCTT CGAGGACAAT CACCGATCCT ACGGCTATCG TCGGGTGCAG GCAGCGCTGA GCCGGCAACG GGTGTTTCTA TCGGAGAAAG TTGTGCGTCG CCTCATGAAA CAAGGCGGCC TACACGCGGC CAGGCCCAAA CGGCGCCGAT ACCGTTCTTA TATCGGCGAA ATCAGCCCTG CCCCAGAGAA CATCATCAAT CGCGATTTCC ACGCTGACGC CCCCAACGAA AAGTGGGTGA CGGATATCTC CGAGTTCCAG ATTCCTGCGG GTAAGGTATA TCTATCGCCC ATGATCGACT GCTTCGATGG CATGGTAGTC AGTTGGACGA TTGGCACAAG CCCTGACGCT GAGCTCGTGA ATACCATGTT GGATGCGGCT ATCGAGACCG TGACCGAAGA CGATGAGACG CCGATCGTGC ATTCCGATCG GGGTGGCCAC TACCGCTGGC CTGGCTGGCT ATCGCGGGTT GCAAAGGCTA ATCTGATCCG ATCCATGTCG CGTAAAGCCT GCTCCCCGGA CAACGCGGCC TGCGAGGGAT TCTTCGGCAG GCTGAAGACC GAGATGTTCT ATCCGGGAGA CTGGCGTTCG ACGACCATTG CGGAGTTTGT CGAGCTACTG AACGCCTACG TTCGCTGGTA CAACGAGAAA CGGATCAAGG GCTCGCTTGG CTATCTCAGC CCCATCGAGT ACCGTGAAAG CCTCGGGCTA ACGACGTAA
|
Protein sequence | MYSYEDRVRA VELYLKLGKR VKATIRQLGY PTKNSLKAWC AEFESSGDLQ KEYVRVNPKY SEEQKNLALE HYVNHGQCLS FTLRALGYPC RQILTAWVRE RYPETRKYVV GKRGRPAASL PSRQAAVYEL CTRQGSAEAV ARALDVDRVT LYNWKNQLLG REAPASMKRD KRSPAETDRD ELERQVEELR RDIRNLQLEH DLLKKANELV KKDLGVDLPL LSNREKTTLV DALREEYGLA ELLARLDLAR SSYFYHRSSI RAADKYAEVR CTVAEIFEDN HRSYGYRRVQ AALSRQRVFL SEKVVRRLMK QGGLHAARPK RRRYRSYIGE ISPAPENIIN RDFHADAPNE KWVTDISEFQ IPAGKVYLSP MIDCFDGMVV SWTIGTSPDA ELVNTMLDAA IETVTEDDET PIVHSDRGGH YRWPGWLSRV AKANLIRSMS RKACSPDNAA CEGFFGRLKT EMFYPGDWRS TTIAEFVELL NAYVRWYNEK RIKGSLGYLS PIEYRESLGL TT
|
| |