| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1108 |
|---|
| Symbol | |
|---|
| ID | 6122787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1213005 |
|---|
| End bp | 1214924 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641637683 |
|---|
| Product | terminase GpA |
|---|
| Protein accession | YP_001764406 |
|---|
| Protein GI | 170732459 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5525] Bacteriophage tail assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAG CGCTGGACGA TCCGACCGTG CAGAAGATCG TGTGCATGAA GTCGGCGCAG
GTCGCGTGGA CAGACGGCGT GCTGCTTAAC TACATCGGCA AGCGGATCGA CGTTGACCCG
TGCCCGATGA TTGTCATGTT CCCGAAAGAG AAGACGGCGA AGAAGTTCAA TCTGGAGAAG
TTCGAGCCGA TGGTCGAGGT GACGCCTCGC CTCTCGGCGA AATTGCCGGT TCACGCGGCC
CGCGACAAAA ACAACTTGTG GGATCACAAG ACGTTCGCGC GTGGCTTCCT GAAGTTCATC
ACGTCGAACG CGCCGGACGA AGTGAAGTCG ACACCGGCCC CGGTCGTCGC GGTCGAGGAG
CCGGACGACG CGAATACGAA CGTGCGCGAG CAGGGCGATT CGATCACGCT GCTGGAGGAA
CGGAACAAGA GCTATTCGGC CCGGCGGCGC AAGATGATCT TGGGCGGCAC GCCGACCATC
GACGGCCTGT CGCGCATCCA GCAGGCTTAC GCGGCATCGG ATCAGCGCGT GTATCTGGTG
CCGTGCCCTG ATTGTGACGA GGAGCATGAG CTGGCGTGGG AAAACGTCAC GTGGAGCGAG
GGCGCCGAAG TCGTACATGA GGTCTACGGC CGCGCACAAC CGGAGACGGC GCGTTACACC
TGCCCGCATT GCGGCTCGTT GTGGGACGAC GCGACACGTA TTCGCGCTGT CCGTCGCGGG
CGATGGGTTG CGACGGCCCC GTTTCACGGC GTTGCCGGCT TCCGCATCAA CGAGCTGGTG
TCGCCGTTCC CCGGCTCGAA CATGGCCGAG CTGGTCAAGA AGTGGTTGAC GGCCGACAAG
GCGCTGCGCG AGGGCGACGA TACGAAGATG CGTTCGTTCG TGAACAACTC GCAGGGCCGC
GCGTACAAGT ACAAGACCGA TCTGCCCGAG CTGGACGTGC TCGCGCAACG TGCGCTGCCG
TACGCGGAGC TGACGGTGCC GCTCGGCGGT CTGGTGTTGA CGCTCGGCGT CGACGTGCAA
CACGACCGGC TCGCGGTCGT CGTGCGTGCA TGGGGACGCG GCGAGGAAAG CTGGCTCGTC
GTGTGGGGAG AGATCTACGG CAAGGTGACG GAGCAGCAGC AAGACCCGAT GACGGGCGGT
GTTTGGGGCG CGTTGACGAT GCTGTTGTCG CACGGATACC GCCATGAGAA CGGCTGGCTG
ATGCGTGTAC GCGCAACGTC GATCGACTCG TCAGACGGAG CGACGTCGGA CGCGGTATAC
AAGTACGTGC GCGCGGCGCA GAAGGCCGGT TACAACGTCA TGGCCGCGAA GGGCAGTAGC
AACATCGACG CGGAGATCTT CAGCGTACCG AAGGCGTCGA TCGACTCGAC GCGCAACAAC
AGCAAGGCTG CGAAGTACGG GCTGCGGCCG TATATGGTCG GTGTCAGCCG CGCGAAGGAT
CTGATCCTCG AAAACCGGCT GAAGCTCGAA GGCGACGGGC CGGGCCGCAT GCACTGGTAT
AGCGGCGTGC GCAGCGACTA CCTGTTGCAG CTCACGGCGG AGGTCAAGGT GCCGGGGCCG
CGTGGCGGTA AGCGCGTGTG GAAGAAGATC AGCCCGCGCA ACGAGGCACT GGATTGCGAA
GGCTACGCAC TGCACGCGGC CCGCAGCGTG AAGGTGCACC TGATGACCGA GGCGCACTGG
CAGGTCGAGC AGCATCGCGC GTCGCAGGTC TCCCTGTTCG ATGCGGTCCC GGTGCTGGAG
GCATTGCCTG CGGCGCTGCC GGCCGAGGTG CCGCCCGATC CACCGGACGT GCCCGAGATT
ATCGAGACTC CGCGGCCGTC GCCGCAAGTA GCAAAACCCA CCGAAACCCC GCCACCGAGC
GGGGTTTCGC GCATTCAGGG GCGTCGTGTT GGTCGCTCGA CGTACCTGAA GCGGCGCTAA
|
|---|
| Protein sequence | MHEALDDPTV QKIVCMKSAQ VAWTDGVLLN YIGKRIDVDP CPMIVMFPKE KTAKKFNLEK
FEPMVEVTPR LSAKLPVHAA RDKNNLWDHK TFARGFLKFI TSNAPDEVKS TPAPVVAVEE
PDDANTNVRE QGDSITLLEE RNKSYSARRR KMILGGTPTI DGLSRIQQAY AASDQRVYLV
PCPDCDEEHE LAWENVTWSE GAEVVHEVYG RAQPETARYT CPHCGSLWDD ATRIRAVRRG
RWVATAPFHG VAGFRINELV SPFPGSNMAE LVKKWLTADK ALREGDDTKM RSFVNNSQGR
AYKYKTDLPE LDVLAQRALP YAELTVPLGG LVLTLGVDVQ HDRLAVVVRA WGRGEESWLV
VWGEIYGKVT EQQQDPMTGG VWGALTMLLS HGYRHENGWL MRVRATSIDS SDGATSDAVY
KYVRAAQKAG YNVMAAKGSS NIDAEIFSVP KASIDSTRNN SKAAKYGLRP YMVGVSRAKD
LILENRLKLE GDGPGRMHWY SGVRSDYLLQ LTAEVKVPGP RGGKRVWKKI SPRNEALDCE
GYALHAARSV KVHLMTEAHW QVEQHRASQV SLFDAVPVLE ALPAALPAEV PPDPPDVPEI
IETPRPSPQV AKPTETPPPS GVSRIQGRRV GRSTYLKRR
|
|---|
| |