Gene Bcenmc03_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1088 
Symbol 
ID6122768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1192558 
End bp1194054 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content68% 
IMG OID641637660 
Productprotease Do 
Protein accessionYP_001764387 
Protein GI170732440 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.648763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC TCACGCTGCG CAAAGTGCTC GCGGCGGCGG CGCTGTGTGC CTGCCTGCCG 
CTCGTCCCGC AAACCGCGGT CGCTGTCACG CCTCCGGCTG CCAGCCTTCC CGATTTCGCC
GACCTCGTCG AAAAGGTCGG CCCGGCCGTC GTGAACATCC GGACCACCGC CAACGTGCCG
ACGAGCGGCC CGCGCGGGAT GCTCCCGCCC GGCTTCGACA ACGGCGACAT GTCGGAATTC
TTCCGGCGCT TCTTCGGCAT TCCGCTGCCG CAGGCGCCCG GCAACGGCGG CGGCAACGGC
AGCAACCCGA AGAATGCGCC GGCGCCGGAC AACGGGCCCG ACACCGAGCA GAATCGCGGC
GTCGGCTCGG GCTTCATCGT GTCGGCCGAC GGTTATGTGA TGACCAATGC GCACGTCGTC
GACGATGCGG ACACCATCTA CGTGACGCTG ACCGACAAGC GCGAATTCAA GGCGAAGCTG
ATTGGCGTCG ACGACCGCAC GGACGTCGCG GTCGTCAAGA TCCAGGCGTC GAACCTGCCG
GTCGTCGCGA TCGGCGATTC GAACAAGGTG CGCGTCGGCG AGTGGGTCGT CGCGATCGGT
TCGCCGTTCG GCCTCGACAA CACGGTCACG GCCGGCATCG TCAGCTCGAA GAGCCGCAAT
ACGGGCGACT ACCTGCCGTT CATCCAGACC GACGTCGCCG TGAACCCCGG CAACTCGGGC
GGCCCGCTGA TCAACATGCA GGGCGAGGTG ATCGGCATCA ACTCGCAGAT CTACAGCCGC
ACCGGCGGCT TCATGGGCAT TTCGTTCGCG ATTCCGATCG ACGAGGCGAT GCGCGTGGCC
GACCAGCTGA AGGCGACGGG CAAGGTCACG CGCGGCCGGA TCGCGGTGGC GATCGGCGAG
GTGACGAAGG ACGTGGCCGA TTCGATCGGA CTGCCGAAGG CCGAAGGTGC GCTCGTCAGC
AGCGTCGAGC CGGGCGGCCC GGCCGACAAG GCCGGTATCC AGCCGGGCGA CATTATCCTG
AAGTTCAATG GCCGTCCGGT CGACGCGGCG TCGGACCTGC CGCGCATGGT CGGCGACACG
AAGCCCGGCA CGAAGGCGAC GGTCAACGTG TGGCGCAAGG GTCAGGCACG CGATCTGCCG
ATCACGATCG CCGAGACGCC GGCCGAGTCG ACGGCAAAGG CCGAGCAGCG CAAGAACGCG
CCGCAGAAGC CGCGCCAGAC CAATTCGCTC GGCCTGACGG TCAGTGACCT GACGGCGGAG
CAGTTGAAGA CGCTGAAGCT GAAGAACGGG GTGCAGATCG ACGGCGTCGA CGGCCCGGCC
GCCCGTGCGG GCCTGCAGCG CGGCGACATC GTGCTGCGCG TCGGCGACAC CGACATCACG
AGCGCGAAGC AGTTCGCCGA CGTGACCGCG CAGCTCGATC CGCAGAAGGC GGTCGCGGTG
CTCGTGCGGC GTGGCGACAA CACGCAGTTC GTGCCCGTGC GGCCGCGCCA GAAGTAA
 
Protein sequence
MTKLTLRKVL AAAALCACLP LVPQTAVAVT PPAASLPDFA DLVEKVGPAV VNIRTTANVP 
TSGPRGMLPP GFDNGDMSEF FRRFFGIPLP QAPGNGGGNG SNPKNAPAPD NGPDTEQNRG
VGSGFIVSAD GYVMTNAHVV DDADTIYVTL TDKREFKAKL IGVDDRTDVA VVKIQASNLP
VVAIGDSNKV RVGEWVVAIG SPFGLDNTVT AGIVSSKSRN TGDYLPFIQT DVAVNPGNSG
GPLINMQGEV IGINSQIYSR TGGFMGISFA IPIDEAMRVA DQLKATGKVT RGRIAVAIGE
VTKDVADSIG LPKAEGALVS SVEPGGPADK AGIQPGDIIL KFNGRPVDAA SDLPRMVGDT
KPGTKATVNV WRKGQARDLP ITIAETPAES TAKAEQRKNA PQKPRQTNSL GLTVSDLTAE
QLKTLKLKNG VQIDGVDGPA ARAGLQRGDI VLRVGDTDIT SAKQFADVTA QLDPQKAVAV
LVRRGDNTQF VPVRPRQK