Gene Bcenmc03_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1086 
Symbol 
ID6122766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1190866 
End bp1191483 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID641637658 
Productanti sigma-E protein, RseA 
Protein accessionYP_001764385 
Protein GI170732438 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGG TCAATACGCA ATCGCAAGCG TGCTCGCGCG GCGAGCGCCT TTCCGCGCTG 
GTCGACGGCG AAATGTTCGA TGGCCCGGAT CACGGGCAGT TTCTGGCTGA GCTCGACCGC
GCGGATCGCG CCGTGTGGGC CCATTACCAC CTGATCGGCG ATGCGCTGCG CTCGGACGAG
CTCGCGCTGT CGCCCGCGCT GAGCGTCGCG TTCACCGCGC GCATGTCGGC GGCGCTCGAA
AGCGAGCCGC ACCTGTTGGC ACCGGCGGCC GCGCCGGTCG CGCGCAAGCT GCTGTCGCTG
CGCCGCCGTG TCGTGCCGGC ATTCGCGGTG GCCGCCGCGG CCGCCACGCT GACGTGGATC
GTCGTCCCGC AGATGCAGAC GGCCGGTGCG CCGGGCGCCG TCCAGGTTGC ATCGGTGGGC
GCGCCGCAGA ACGGCAACCT GCAGCGCGTG ACGGTTGCGC AGGCATCGGC CCAGCCGGGT
CTGCAGGACG TCAACATCAT TCGCGACGCC AGCCTCGACC AATACCTTGA AGCGCACCAG
CAATTCGCCC AGCAGCCCGT CGTCACGGGT TCGATGCCGC TGATCCGCGC TGCCGTGACC
ACCACGCCAG GCCAATAA
 
Protein sequence
MGSVNTQSQA CSRGERLSAL VDGEMFDGPD HGQFLAELDR ADRAVWAHYH LIGDALRSDE 
LALSPALSVA FTARMSAALE SEPHLLAPAA APVARKLLSL RRRVVPAFAV AAAAATLTWI
VVPQMQTAGA PGAVQVASVG APQNGNLQRV TVAQASAQPG LQDVNIIRDA SLDQYLEAHQ
QFAQQPVVTG SMPLIRAAVT TTPGQ