| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1050 |
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| Symbol | |
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| ID | 6122730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1156842 |
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| End bp | 1158230 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641637620 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001764349 |
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| Protein GI | 170732402 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.456746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATT CCGGTCTTAC GCGGACGGCC GCCGCGCCGC CGTCCCTGTC CAGTCATGCC
GCCGATACCG CGCGCCTCGC CGCACCGCTC GCGATCGCGC AACTCTCCCA GATGGCGATG
AGCGTCACCG ACACGGTGCT GCTCGGTTCG CTCGGCCCCG ATTCGCTCGC GGCAGGCGGG
CTCGGCGCGA ACTTCTTCTT CGTGATCGTG ACGATCCTGC AAGGCGTGCT GTCGTCGGTC
AGCGTGAGCG TCGCGCATGC GCGCGGCGCG CAGGCCGAGG ATCGCGTGCC GCACATCTAC
TGGACGGGCT TCGCGCTGTC CGTGCTGCTC GCGATTCCGG CGATCGTCGC GCTGTCGCTG
GCCGAACCGA TCCTGCTGAT GTTCCACGAG CCGCCGCTGC TCGCGCATCA CGTCGGCGAA
TACACGGGCA TCCTGCGCTA CGCGGCGCTC GGCAGCCTGA TCGGCGTCGG GCTGATGCGC
GCGTTCCTGC CCGCGATCGG CGCCGCGCGT CGGCTCCTGT GGGTGTCGAT CGGCGGCGTC
GGCGTGAACG GCGTGCTGAA CTACGGGCTG ATCCACGGCG CATTCGGGCT GCCGCGCCTG
GGCTTTCTCG GCTCAGCCGT CGCGACGACG ATCACGATCT GGCTCACCGC GCTCGCCCTC
ATCTGGCTGC TGCACGGCCG GCAGCGCTTC CGCCATTTCG TGACCGCCGC GCGCCCGAAG
CTGCCCGTGA TGGGCGAGCT GATCGGCATC GGCTGGCCGG TGGCGATCAC GTACGGGGTC
GAATCGACGC TGTTCCTCGC CACCGGCCTC ACGGTCGGCG TGCTGGGCGC GACGTCGCTC
GCCGCGCACC AGATCGCGCT GAACGTCGCG TCGGTATCGT TCATGGTGCC GCTTGCGATC
GGCCAGGCGG CCAACGTGCG CGTCGGCTAC TGGATCGGTG CGGGCTCGCC CGTCGCCGCT
CGGCACGCGG GCTTCGTCGC GCTGGCGCTC GGCGTCGGCT TCATGTCGCT GTCGGGCCTC
GTGATGATCG TCGCGCCGCA CACGATCGTC GGCCTGTACC TGCATCTCGA CGATCCGGCC
AACGCGGCCA CGGTGTCGCT CGCCGCGTCG CTGCTCGGCA TCGCCGCGGT GTTCCAGATC
GTCGACGGCA TGCAGACCGT CGCGTCGGGT GCGCTGCGCG GCCTGAAGGA CACTCGCATC
CCGATGCTCG CCGCGACCTT TGGCTACTGG GGCATCGGCT TCCCGACCGG CTACTGGTTC
GCGTTCCACG CGGGCCTGGG CGCGCGCGGC CTGTGGTGGG GACTCGCGGC CGGGCTCGCG
AGCGTCGCCG CGCTGATGGC CTGGCGCTTT CACCGCAAGA CCACTTCGCT GATCGCGACG
GCCCGCTAG
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| Protein sequence | MSHSGLTRTA AAPPSLSSHA ADTARLAAPL AIAQLSQMAM SVTDTVLLGS LGPDSLAAGG
LGANFFFVIV TILQGVLSSV SVSVAHARGA QAEDRVPHIY WTGFALSVLL AIPAIVALSL
AEPILLMFHE PPLLAHHVGE YTGILRYAAL GSLIGVGLMR AFLPAIGAAR RLLWVSIGGV
GVNGVLNYGL IHGAFGLPRL GFLGSAVATT ITIWLTALAL IWLLHGRQRF RHFVTAARPK
LPVMGELIGI GWPVAITYGV ESTLFLATGL TVGVLGATSL AAHQIALNVA SVSFMVPLAI
GQAANVRVGY WIGAGSPVAA RHAGFVALAL GVGFMSLSGL VMIVAPHTIV GLYLHLDDPA
NAATVSLAAS LLGIAAVFQI VDGMQTVASG ALRGLKDTRI PMLAATFGYW GIGFPTGYWF
AFHAGLGARG LWWGLAAGLA SVAALMAWRF HRKTTSLIAT AR
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