Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1016 |
Symbol | |
ID | 6122696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1124377 |
End bp | 1125300 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641637586 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_001764315 |
Protein GI | 170732368 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCG CTTTCTACAC GCACCCCGAC TGCATGCTGC ACGAGATGGG GGAATGGCAT CCGGAATGCC CGGCCCGCCT GTCGGCGATC CAGGATCAAC TGATTGCGAG CCGCATCGAC GACCTGATCG TGCACGAAAC CGCGCCATTC GCGAGCGAGG TCGCGCTGGG TCGCGTGCAT ACGCAGGCGC ACATCGACTA CATCCGGAGC ATGACGCCGG TCGACGGTCA CGTCGAGATC GATCCCGATA CGCTGATGAA TCGCGACACG TGGCGCGCGG CGCTGCGCGC GGCCGGCGCC GCGATCGCGG CGACCGACGC GGTGATCGAA GGGCGCTATG CGAATGCGTT CTGCGGCGTC CGTCCGCCCG GTCACCATGC GGAACCCGCG CGCGCGATGG GCTTCTGCTT CTTCAACAAT GTCGCGATCG CCGCGCGGCA TGCGCTCGAC GTATACGGCA TCGAGCGTGT CGCGATCATC GATTTCGACG TGCACCACGG CAACGGCACC GAGGCGGCGT TCGCGAACGA CGAGCGCGTG CTGATGTGCA GCTTCTTTCA GCATCCGCTG TATCCGTTCT CGGGCGTCGA TCATCAGGCG CCGAACATGG TCAACCTGCC GATGCCCGCG CGCAGCAACG GGATGGCGAT CCGCGAAGCC GTCGACATGT TCTGGCTGCC GCGCCTCGAT GCGTTCAAGC CGCAGATGCT GTTCGTGTCG GCCGGGTTCG ATGCGCATCG CGAGGACGAC ATCGGCAATC TCGGCCTCGT CGAGGCCGAC TTCGAATGGC TGACCGCCCA GATCGTCGAC GTGGCACGCC GACATGCGCA GGGCCGCATC GTCAGCTGCC TCGAGGGCGG CTACAACCTG TCCGCGCTGG GGCGCAGCGT CGTCGCGCAC CTGCGCGTGC TGGCCGGAAT CTGA
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Protein sequence | MATAFYTHPD CMLHEMGEWH PECPARLSAI QDQLIASRID DLIVHETAPF ASEVALGRVH TQAHIDYIRS MTPVDGHVEI DPDTLMNRDT WRAALRAAGA AIAATDAVIE GRYANAFCGV RPPGHHAEPA RAMGFCFFNN VAIAARHALD VYGIERVAII DFDVHHGNGT EAAFANDERV LMCSFFQHPL YPFSGVDHQA PNMVNLPMPA RSNGMAIREA VDMFWLPRLD AFKPQMLFVS AGFDAHREDD IGNLGLVEAD FEWLTAQIVD VARRHAQGRI VSCLEGGYNL SALGRSVVAH LRVLAGI
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