Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1004 |
Symbol | |
ID | 6122684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1111936 |
End bp | 1113240 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637574 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001764303 |
Protein GI | 170732356 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTACC TCGATCTCGG CCCGTACTCC AGCGCATCGG GCACCGTGCG CCTGCCCGGC TCGAAGAGCA TTTCGAACCG CGTGCTGCTG CTCGCGGCGC TCGCCGAAGG CGAAACGACG ATCACCAACC TGCTCGACTC CGACGACACG CGCGTGATGC TCGACGCACT CGGCAAGCTC GGCGTGAAGC TCGCGCGCGA CGGCGACACC TGTGTCGTCA CCGGCACGCG CGGCGCGTTC ACCGCGAAGA CGGCCGACCT GTTCCTCGGC AACGCGGGCA CGGCCGTGCG GCCGCTGACC GCCGCACTCG CGGTGAACGG CGGCGACTAC CGTGTGCACG GCGTGCCGCG CATGCACGAG CGGCCGATCG GCGATCTCGT CGACGGCCTG CGCCAGATCG GCGCGCAGAT CGACTACGAG CTGAACGAAG GTTACCCGCC GCTGCGGATC AAGCCTGCGA CGATTTCGGT CGATGCGCCG ATCCGCGTGC GCGGCGACGT GTCGAGCCAG TTCCTCACCG CGCTCCTGAT GACGCTGCCG CTCGTGAAGG CGAAGGATGG CCGGACCGTC GTCGAAGTCG ACGGCGAGCT GATCTCGAAG CCGTATATCG ACATCACGAT CCGGTTGATG GCGCGCTTCG GCGTGACCGT CGAGCGCGAC GGCTGGCAGC GCTTCGTCGT GCCGGCCGGT GTTCGCTACA AGTCGCCGGG GCGAATCATG GTCGAGGGCG ACGCGTCGTC CGCGTCGTAT TTCCTCGCAG CCGGCGCGCT CGGCGGCGGC CCGCTGCGGG TCGAGGGCGT GGGGCGGGCG AGTATCCAGG GTGACGTCGG TTTCGCGAAT GCGCTGATGC AGATGGGCGC GAACGTGACG ATGGGCGACG ACTGGATCGA CGTGCGCGGC ATCGGCCACG ATCACGGCAA GCTCGAGCCG ATCGACATGG ACTTCAACCT GATTCCCGAC GCGGCGATGA CCATCGCGGT CGCGGCGCTG TTCGCGAACG GCACGAGCAC GCTGCGCAAC ATCGCGAGCT GGCGCGTGAA GGAGACCGAC CGCATCGCCG CGATGGCGAC CGAGTTGCGC AAGGTCGGCG CGATCGTCGA GGAAGGCCCC GACTATCTCG TCGTCACGCC GCCGGAAAAG CTCACGCCGA ACGCGGCGAT CGATACGTAC GACGATCACC GGATGGCGAT GTGCTTCTCG CTCGTCAGCC TGGGCGGCGT GCCCGTGCGG ATCAACGATC CGAAGTGCGT CGGCAAGACG TTCCCCGACT ATTTCGACCG CTTCGCCGCG CTCGCCAAGG CCTGA
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Protein sequence | MDYLDLGPYS SASGTVRLPG SKSISNRVLL LAALAEGETT ITNLLDSDDT RVMLDALGKL GVKLARDGDT CVVTGTRGAF TAKTADLFLG NAGTAVRPLT AALAVNGGDY RVHGVPRMHE RPIGDLVDGL RQIGAQIDYE LNEGYPPLRI KPATISVDAP IRVRGDVSSQ FLTALLMTLP LVKAKDGRTV VEVDGELISK PYIDITIRLM ARFGVTVERD GWQRFVVPAG VRYKSPGRIM VEGDASSASY FLAAGALGGG PLRVEGVGRA SIQGDVGFAN ALMQMGANVT MGDDWIDVRG IGHDHGKLEP IDMDFNLIPD AAMTIAVAAL FANGTSTLRN IASWRVKETD RIAAMATELR KVGAIVEEGP DYLVVTPPEK LTPNAAIDTY DDHRMAMCFS LVSLGGVPVR INDPKCVGKT FPDYFDRFAA LAKA
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