| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1003 |
|---|
| Symbol | |
|---|
| ID | 6122683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1110996 |
|---|
| End bp | 1111922 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641637573 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_001764302 |
|---|
| Protein GI | 170732355 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGGCT TTGCATTCAA CAAACTGGTC ATCTTCGGCG TCGGCCTGAT CGGCGGATCG
CTGGCCCGCG CGCTGCGCGA GCGCGCGCCG GGCGGCGCGG GCGAGATCGT CGGCGTGGGC
CGTTCGCGCG CGTCGGTCGA GCGCGCGCTG TCGCTCGGCG TGATCGATCG CGCGGCGGCG
CTCGACGACG ACGTGCAGTT GCGCGACGCG CTTGCCGGCG CCGATCTCGT CTTGCTGGCC
GCGCCCGTCG CGCAGACGGG CCCGCTGCTC GCGCGCATCG CGCCGTGGCT CGACGGCGCG
ACGATCGTCA CCGATGCGGG CAGCACCAAG TCCGATGTCG TCGCGGCCGC GCGCGACGCG
CTCGGCGCGC GGATCGCGCA GTTCGTGCCG GGTCATCCGA TCGCGGGGCG CGAGTCGAGC
GGCGTCGAGG CGGCGTTGCC CGACCTCTAC GTCGGCCGCA ACGTCGTGCT GTGCCCGCTG
CCGGAGAACG CGCCCGACGC GGTCGCCCGG ATCGACGCGA TGTGGCGCGC GACCGGCGCC
GACGTGCGCA CGATGAGCAC CGAACAGCAC GACCGCGTAT TCGCGTCGAT CAGCCATCTG
CCGCACGTGC TGTCGTTCGC GCTCGTCGAG CAGATTCTCG GCGAGGCCGA CGCGGAACTG
AAATTCTCGT ACGCGGCCGG CGGTTTCCGC GATTTCACGC GCATCGCGGC GTCGAACCCG
GAAATGTGGC GCGACGTGTG CGTCGCGAAC CGCACGGCGC TGCTCGACGA ACTCGACGGC
TACACGCGCG TGCTCACGCG GCTGCGTGCG GCGATCGACG CCGGCGACGG CGCGGCGCTC
GAAGCCGTAT TCACGCGCTC GCGCGCCGCG CGCAAGGCAT GGCAGGAACG CGGCGGCACG
CCCGCTGCCG AACCGGTCAA GAAATAA
|
|---|
| Protein sequence | MSGFAFNKLV IFGVGLIGGS LARALRERAP GGAGEIVGVG RSRASVERAL SLGVIDRAAA
LDDDVQLRDA LAGADLVLLA APVAQTGPLL ARIAPWLDGA TIVTDAGSTK SDVVAAARDA
LGARIAQFVP GHPIAGRESS GVEAALPDLY VGRNVVLCPL PENAPDAVAR IDAMWRATGA
DVRTMSTEQH DRVFASISHL PHVLSFALVE QILGEADAEL KFSYAAGGFR DFTRIAASNP
EMWRDVCVAN RTALLDELDG YTRVLTRLRA AIDAGDGAAL EAVFTRSRAA RKAWQERGGT
PAAEPVKK
|
|---|
| |