Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0998 |
Symbol | |
ID | 6122678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1103972 |
End bp | 1104640 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641637568 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001764297 |
Protein GI | 170732350 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.18128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC TTTCAAAGCT CGCGTTCATT GCAGCTACCG CAGTTATGGC TGCATCCGCT TCGGCACAGT CGGTGCCGGC GTCGCGTCAA GCCGTCAATG ACAACTGGGT GAACGGCACG GGCGAATGGG TGTGGATGAA CGGCACGAAC GAGCTCTGCT GGCGCGATGC GTTCTGGACG CCGGCCACCG CCAACGCGAA GTGCGATGGC GCACTGGTCG CCCAGGCACC GCAGCCGCCG GTCGCTCCGG TCGCTCCGGC CATCACGAGC CAGAAGATCA CGTATCAAGC TGACGCACTG TTCGACTTCG ACAAGGCAAC GCTCAAGCCG CTGGGCAAGC AGAAGCTGGA CGAACTGGCT TCGAAGATCG AAGGCATGAA CACGGAAGTG GTCGTCGCAA CGGGCTACAC GGACCGTATC GGTTCGGACA AGTACAACGA CCGTCTGTCG CTGCGCCGTG CGCAAGCCGT GAAGTCGTAC CTGGTCAGCA AGGGTGTGCC GGCCAACAAG ATCTACACGG AAGGCAAGGG CAAGCGCAAC CCGGTTACGA CTGGCTGCAA CCAGAAGAAC CGCAAGCAAC TCATCGCCTG CCTCGCACCG GACCGCCGCG TGGAAGTCGA AGTGGTTGGT ACGCAGCAAG TGCAGAAGAC GACCGTTCCG GCAAACTAA
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Protein sequence | MNKLSKLAFI AATAVMAASA SAQSVPASRQ AVNDNWVNGT GEWVWMNGTN ELCWRDAFWT PATANAKCDG ALVAQAPQPP VAPVAPAITS QKITYQADAL FDFDKATLKP LGKQKLDELA SKIEGMNTEV VVATGYTDRI GSDKYNDRLS LRRAQAVKSY LVSKGVPANK IYTEGKGKRN PVTTGCNQKN RKQLIACLAP DRRVEVEVVG TQQVQKTTVP AN
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