| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0996 |
|---|
| Symbol | |
|---|
| ID | 6124880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1102394 |
|---|
| End bp | 1103107 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641637566 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_001764295 |
|---|
| Protein GI | 170732348 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.137981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTC CCCTTTCGAC CGCGCGGATC GCAGACGAAC CGCGCCTGTT GCACTGCGAT
GCGGTCCTGT TCGATCTGGA TGGCACGCTC GCCGACACGG CGCCCGACCT CGCGGCAGCC
GTCAACAAGA TGCAGCGCGA ACGCGGCCTG CCCGAAACGT CGCTCGACGT GTTGCGGCCG
CTGGCCTCGG CCGGCGCACG CGGCCTGCTC GGCGGCGCGT TCGGCATCGA TCCTCACACG
CCCGGCTACG AAGCGATGCG CGACGAGTTC CTGGCCAACT ACGCGACCGA TCTGTGCGTG
CATACGACGC TGTTCCCCGG CATCGGCGAC GTGCTCGACG AACTCGATGC GCGCGGCGTA
CGCTGGGGCA TCGTCACGAA CAAGGCGATG CGGCTCACCG CACCGCTCGT CGATCTGCTC
GGTCTCGCGC CGCGCGCCGC CTGCGTCGTC GGGGGCGACA CAACACCGCA CTCGAAACCG
CATCCGGCTC CGCTGCTGCA TGCCGCCGAG CAACTGACAC TCGCGCCCGA GCGTATCGTC
TACGTGGGTG ACGACCTGCG CGACATCCAG GCCGGCAGCG CCGCCGGCAT GGCTACGGTC
GCGGCCGCAT ACGGCTATTG CGGCGACGGT ATCGCGCCGG CCGACTGGCA GGCCCAGCAC
CTCGTCGGCA CGACGCAGGA ACTGCGGCAC CTGCTGCGCG ATGTTGGGCT ATAA
|
|---|
| Protein sequence | MTTPLSTARI ADEPRLLHCD AVLFDLDGTL ADTAPDLAAA VNKMQRERGL PETSLDVLRP
LASAGARGLL GGAFGIDPHT PGYEAMRDEF LANYATDLCV HTTLFPGIGD VLDELDARGV
RWGIVTNKAM RLTAPLVDLL GLAPRAACVV GGDTTPHSKP HPAPLLHAAE QLTLAPERIV
YVGDDLRDIQ AGSAAGMATV AAAYGYCGDG IAPADWQAQH LVGTTQELRH LLRDVGL
|
|---|
| |