| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0986 |
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| Symbol | |
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| ID | 6122666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1089108 |
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| End bp | 1090403 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641637556 |
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| Product | general substrate transporter |
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| Protein accession | YP_001764285 |
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| Protein GI | 170732338 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.535486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.151921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAA CGTCCCCTGC GATCGCGCAG GAATCGAAAG TCCGCACCGT CTTCCGGGTC
GTCAGCGGCA ACTTCCTGGA AATGTACGAC TTCATGGTCT ACGGGTATTA CGCGTCGGCC
ATCGCGAAAA CGTACTTTCC GAGCGGTAAC GCGTTCGCGT CGCTGATGCT GTCGCTGTCG
GTATTCGGCG CGGGTTTCCT GATGCGTCCG GTCGGCGCGA TCGTGCTCGG CGCGTACATC
GACCATCACG GCCGCCGCAA GGGCCTGATC CTGACGCTCG GGCTGATGGC GATCGGCACG
CTCACCGTGG CCGCGATCCC GGGCTATGCG ACGATCGGCG TACTCGCGCC GGTGCTCGTG
CTGCTCGGCC GGTTGTTGCA GGGCTTCTCG GCGGGCGTCG AGCTCGGCGG CGTGTCGGTC
TACCTGTCGG AGATCGCGAC GAAGGGCCAC AAGGGGTTCT ATACGTCGTG GCAGTCGGGC
AGCCAGCAAG TGGCCGTCGT GTTCGCCGCG TTCGTCGGTG TCGTGTTGAA CCGCACGCTG
CCGGTCGAGG AAATGACCGC GTGGGGCTGG CGCATTCCAT TCCTGATCGG CTGCCTGATC
GTGCCGTTCC TGTTCCTGAT TCGCCGGTCG CTGAAGGAGA CGGACGAGTT TCTTGCGAAG
CGTCACCGTC CGACGATGGG CGAGATCATG CGCTCGATGC TCGACAACTG GGGTGTCGTG
GTGGCCGGCA TGGGGATGGT GATCATGACG ACGGTGTCGT TCTACATGAT TACCGCCTAC
ACGCCGACCT TCGGCAAGGA AGTGCTGCAC CTGTCGTCGC TCGACGCGCT CGTCGTGACC
GTTTGCGTCG GGATCTCGAA TCTCGTGTGG TTGCCGCTGT CCGGTGCGCT GTCCGACCGC
ATCGGCCGCC GCCCGGTGCT GATCGCCTTC ACCGTGCTGA CGCTGGTGTC GGCTTACCCG
GCCGTGCTGT GGCTCGTCGG CGATCCGTCG TTCCTGCGAC TGCTCGCGGT CGAGTTGTGG
CTGTCGTTCC TGTACGCGTC GTACAACGGC GCGATGGTCG TCGCGCTGAC CGAAGTGATG
CCGGCCGACG TGCGTACGGC CGGCTTCTCG CTCGCGTACA GCCTGGCCAC GACGATCGGC
GGCTTCACGC CGGCGATCTC GACGCTGCTG ATCCACCAGA CGGGCAACAA GGCGGCGCCG
GGGCTGTGGC TGAGCGTGGC CGCGATCTGC GGCCTGATCG CGACGCTCGT GCTGTATCGC
ACGGCCGATG CGCGCAACCA GTACAAGTCA GCCTGA
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| Protein sequence | MSTTSPAIAQ ESKVRTVFRV VSGNFLEMYD FMVYGYYASA IAKTYFPSGN AFASLMLSLS
VFGAGFLMRP VGAIVLGAYI DHHGRRKGLI LTLGLMAIGT LTVAAIPGYA TIGVLAPVLV
LLGRLLQGFS AGVELGGVSV YLSEIATKGH KGFYTSWQSG SQQVAVVFAA FVGVVLNRTL
PVEEMTAWGW RIPFLIGCLI VPFLFLIRRS LKETDEFLAK RHRPTMGEIM RSMLDNWGVV
VAGMGMVIMT TVSFYMITAY TPTFGKEVLH LSSLDALVVT VCVGISNLVW LPLSGALSDR
IGRRPVLIAF TVLTLVSAYP AVLWLVGDPS FLRLLAVELW LSFLYASYNG AMVVALTEVM
PADVRTAGFS LAYSLATTIG GFTPAISTLL IHQTGNKAAP GLWLSVAAIC GLIATLVLYR
TADARNQYKS A
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