| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0974 |
|---|
| Symbol | pepN |
|---|
| ID | 6122654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1073711 |
|---|
| End bp | 1076404 |
|---|
| Gene Length | 2694 bp |
|---|
| Protein Length | 897 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641637544 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001764273 |
|---|
| Protein GI | 170732326 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.177559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA ACGCCTCCTC CACCGTGATC CGCCGCGCCG ACTACACGCC GCCGGCCTTC
CTCATCGATT CCGTCGCACT CGAATTCGAT CTCGCGCCGG CTCGCACGAT CGTCAGGAAT
ACGATGCGCG TGCGCCGTAA TCCGGATGCC GCGCCCGCGC CGCACCTGGA GCTGATGGGC
GAGGCGCTCG AATTCCTCGG CGCGCGGCTC GATAGCGCAC CGCACGGCGC GGTGCGCGCG
CACGAGCACG GGCTGACGGT CGAGAACGTG CCCGACGCTT TCGAGCTGAC GCTCGAAAGC
GCGTGCGCCC CCGACCAGAA TACGACGCTG TCGGGCCTGT ACGTGTCGAG CGGCAACTTC
TTCACGCAGT GCGAAGCCGA AGGCTTTCGC CGCATCACCT ACTTCCTCGA CCGCCCCGAC
GTGATGGCGT CGTACACCGT CACGCTGCGC GCCGACAAGG CCGCGTACCC GGTGCTGCTG
TCGAACGGCA ACCTCGTCGA TTCGGGCAAC CTGCCCGACG GCCGCCACTT CGCGAAATGG
GAAGACCCGT TCCGCAAGCC GAGCTACCTG TTCGCGCTGG TCGCGGGCAA GCTCGTCGCG
ATCGAGGAAA CGATCACGAC CGGCTCCGGC AAGGAAAAGC TGCTGCAGGT GTGGGTCGAA
CCGGTCGATC TGGACAAGAC GCGTCACGCG ATGGATTCGC TGATCCACTC GATCCGCTGG
GACGAAAAGC GCTTCGGCCT CGAGCTCGAT CTCGACCGCT TCATGATCGT CGCGGTCGGC
GACTTCAACA TGGGCGCGAT GGAGAACAAG GGGCTCAACA TCTTCAACAC GAAGTACGTG
CTGGCGAACC CCGAGACCGC GACCGACACC GATTTCGCGA ACATCGAGTC GGTGGTCGGC
CACGAGTACT TCCACAACTG GACCGGCAAC CGCGTGACCT GCCGCGACTG GTTCCAGTTG
AGCCTGAAGG AAGGCCTGAC GGTATTCCGC GACCAGGAAT TCTCGGCCGA CATGGCCGCG
GGCGACGAGG TCGAATCGGC GGCCCGCGCG GTCAAGCGCA TCGAGGACGT GCGCGTGCTG
CGCCAGTTGC AGTTCGCCGA GGACGCCGGC CCGATGGCGC ACCCGGTGCG CCCGGAGAGC
TACGTCGAGA TCAACAATTT CTACACGATG ACCGTCTACG AAAAAGGCTC GGAAGTCGTG
CGGATGTACC AGACGCTGTT CGGCCGCGAC GGCTTCCGCA AGGGCATGGA TCTCTACTTC
AAGCGCCACG ACGGCCATGC GGTGACCTGC GACGACTTCC GCCACGCGAT GGCCGACGCG
AACGGGCGCG ACCTCGCACA GTTCGAGCGC TGGTACAGCC AGGCCGGCAC GCCGCGCATA
TCGGTGCGTA CCGCATACGA CGCGGCCGCG CGCCGCTATA CGGTCACCCT CGCGCAAGGC
TACGGCGACG CGTCGCCGGC CGCGCGCGAA ACGCAGCAAG GGCCGCTGCT GATCCCGTTC
GCGATCGGCC TGATCGGCCG CGACGGCCGC GACCTGCCGC TGCGTCTGGA CGGCGAAGCC
GCCGCATCGG GCACGACGCG CGTGCTCGAA TTCACCGACA CCGAGCAGAC CTTCACGTTC
GTCGACGTGC CGGAAGCGCC GCTGCCGTCG CTGCTGCGCA ACTTCTCGTC GCCGGTGATC
GTCGAGTACG ACTACAGCGA CGACGATCTC GCGTTCCTGC TCGCGCACGA CAGCGATCCG
TTCAACCGCT GGGAGGCCGG CCAGCGCCTC GCGACGCGCG CGCTGCTGAC GCTCGCCGCA
CGTGCCGCCG CCAACGCGCC GCTCACGCTC GGCGAGAACT TCGTCGCCGC GTTCCGCCGC
GTGCTGACCG ATGAAAGCCT GTCGCCGGCA TTCCGCGAAC TCGCGCTGAC GCTGCCGTCG
GAAACCTACC TCGCCGACCA GATGGCCGAG GCCGACCCGG CCGCCGTGCA TCGCGCGCGC
CAGTTCGTGC GCCGCCAGCT CGCGACCGCG CTGCGCGCCG ACTGGCTCGC CGCGTACGAG
CAGCACGAGA CGCCCGGCGC CTACGAGCCG ACGCCGGAAG CCTCGGGCCG CCGCGCGCTG
AAGAACCTCG CGCTCGCGTA TCTCGCCGAA CTCGAGGACC CGGCCGATGC CGTGCGCCTC
GCCACCGCCC AGTACGACGC GGCGAACAAC ATGACCGATC GCGCGGCGGC GCTCGGCGCG
CTGCTGTCCG CGGCCGCCGC GGGCGCGAAC GAACCGGCCG AGAAGGCGCT CGACGACTTC
TACCGTCGCT TCGAGAAGGA AGCGCTCGTG ATCGACAAGT GGTTCGCGAT GCAGGCGGCG
CAACGCGGTA CGCCCGCGCA GCCGACGCTC GCGAAGGTGC GCAAGCTGCT CGCCCACCCC
GCGTTCAATC TGAAGAACCC GAACCGCGCA CGTTCGCTGA TCTTCAGTTT CTGCGCGGCG
AATCCGGCCC AATTCCACGC GGCCGACGGC TCGGGCTACG CGTTCTGGGC CGAACAGGTG
CTCGCGCTCG ACGCGATCAA CCCGCAGGTC GCGGCACGCC TCGCACGCTC GCTCGAACTG
TGGCGCCGCT TCACGCCGGC GCTGCGCGAC CGGATGCGCG ACGCGCTCGA ACAGGTCGCT
GCCGGCGCGA AATCGCGTGA CGTGCGCGAG ATCGTCGAGA AGGCGCTCGC GTAA
|
|---|
| Protein sequence | MSDNASSTVI RRADYTPPAF LIDSVALEFD LAPARTIVRN TMRVRRNPDA APAPHLELMG
EALEFLGARL DSAPHGAVRA HEHGLTVENV PDAFELTLES ACAPDQNTTL SGLYVSSGNF
FTQCEAEGFR RITYFLDRPD VMASYTVTLR ADKAAYPVLL SNGNLVDSGN LPDGRHFAKW
EDPFRKPSYL FALVAGKLVA IEETITTGSG KEKLLQVWVE PVDLDKTRHA MDSLIHSIRW
DEKRFGLELD LDRFMIVAVG DFNMGAMENK GLNIFNTKYV LANPETATDT DFANIESVVG
HEYFHNWTGN RVTCRDWFQL SLKEGLTVFR DQEFSADMAA GDEVESAARA VKRIEDVRVL
RQLQFAEDAG PMAHPVRPES YVEINNFYTM TVYEKGSEVV RMYQTLFGRD GFRKGMDLYF
KRHDGHAVTC DDFRHAMADA NGRDLAQFER WYSQAGTPRI SVRTAYDAAA RRYTVTLAQG
YGDASPAARE TQQGPLLIPF AIGLIGRDGR DLPLRLDGEA AASGTTRVLE FTDTEQTFTF
VDVPEAPLPS LLRNFSSPVI VEYDYSDDDL AFLLAHDSDP FNRWEAGQRL ATRALLTLAA
RAAANAPLTL GENFVAAFRR VLTDESLSPA FRELALTLPS ETYLADQMAE ADPAAVHRAR
QFVRRQLATA LRADWLAAYE QHETPGAYEP TPEASGRRAL KNLALAYLAE LEDPADAVRL
ATAQYDAANN MTDRAAALGA LLSAAAAGAN EPAEKALDDF YRRFEKEALV IDKWFAMQAA
QRGTPAQPTL AKVRKLLAHP AFNLKNPNRA RSLIFSFCAA NPAQFHAADG SGYAFWAEQV
LALDAINPQV AARLARSLEL WRRFTPALRD RMRDALEQVA AGAKSRDVRE IVEKALA
|
|---|
| |