| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0967 |
|---|
| Symbol | |
|---|
| ID | 6122647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1066988 |
|---|
| End bp | 1067581 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641637536 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_001764266 |
|---|
| Protein GI | 170732319 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000119037 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.243977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAG CCATTCGTGC CAGCCTCGCT GTCGCCGCGC TCGGCGTCGC CCTCCTTTCG
TCGCCGCATA CCGCCCGTGC AGACGGCGAC GACACCGCCC TCACCAACGT CGTTGCGCTC
GCGTCGCAGC GCCTCGCGCT CGCCGAACCC GTGGCGCGAT GGAAATGGGC GAATCACAAG
GCCATCGAGG ACCGGCCGCG CGAAGCGGCC CTGCTCACCG AGGTCGAAAA ACGTGCCCTC
CAGGCCGGCG TCGATCCCGC GTTCGCCCGA ACCTTCTTCG AGGATCAGAT CACGGCAAGC
AAGGACGTGC AGAACGCACT GTTCGCGACC TGGCGCACGA CGCGGCCGCC GGAAGGCGCG
CCGCCCGATC TCGCCACCAG CACGCGGCCG GCACTCGACC GGCTGACGCA GAAGATGCTC
TCCGGCCTCG CGCAGGTCGC CCCGCTTCGC GAGGCGCCCG ATTGCCAGGC GCGGCTCGCG
CGCAGCATCG CGAACTGGAA GACGCTCACG CGCTACGACT CCACGCAGAC GCAGGCACTC
GATACCGCGC TGTCGCACGT CTGCTCCGCC GGCGGGGCCA GCGCGATCGG CTGA
|
|---|
| Protein sequence | MKQAIRASLA VAALGVALLS SPHTARADGD DTALTNVVAL ASQRLALAEP VARWKWANHK
AIEDRPREAA LLTEVEKRAL QAGVDPAFAR TFFEDQITAS KDVQNALFAT WRTTRPPEGA
PPDLATSTRP ALDRLTQKML SGLAQVAPLR EAPDCQARLA RSIANWKTLT RYDSTQTQAL
DTALSHVCSA GGASAIG
|
|---|
| |