Gene Bcenmc03_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0930 
Symbol 
ID6122610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1030020 
End bp1030898 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID641637494 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001764229 
Protein GI170732282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCT TCGCCGATCG CTGGATCCCG AAGCTCGTGC TCGCGCCGAG CGTCGCGATC 
GCCGTGGTGT TCATCTACGG CTTCATCCTG ATTACCGGCT ATCTGTCGCT GACCCGCTCG
CGGCTGTTGC CCAACTACGA ATTCGACGGC TTCGGCCGTT ACACGGACCT GTTCCAGAAC
GACGTGTGGT GGACCTCCGC CGCGAACCTC GGCTGGTTCG GGATTCCGTT CATCGCGATC
TGCGTCGGGC TCGGCCTGTT CCTCGCGATC CTGCTCGACC AGCGGATCCG CAACGAAGGC
GCGCTGCGCG CGATCTTCCT GTACCCGATG GCGCTGTCGT TCATCGTCAC CGGCACTGCA
TGGCAGTGGA TCCTGAACCC GGGCCTCGGC CTCGAGAAGG TGATGCACGA CTGGGGCTGG
ACGAGTTTCT CGTTCGGCTG GCTCGACGAT CCGGACAAGG CGATCTTCTG CGTGGTGATC
GCGGCCGTGT GGCAGTCGAC CGGCTTCGTG ATGGCGCTGT TCCTCGCGGG GCTGCGCGGT
GTCGACGGCG AGATCTTCAA GGCCGCGCAG GTCGACGGCG CGACGCTGCC GATCATCTAC
CGCAAGATCG TGATCCCGAG CATGCGCCCG GTGTTCTTCT CGGTGCTGCT GATCCTCTGC
CACATCACGA TCAAGACCTT CGACCTCGTC GTCGCGCTGA CCGCGGGCGG CCCGGGCACG
TCGTCGTCGC TGCCGGCCAT GTTCATGTAC ACGTTTTCGT TCAACCGCGG CCAGCTCGGG
CTCGGCGCGG CGTCCTCGGT GATGATGCTC GCGACCGTGG TCGCGGTGCT GGTGCCGCTG
ATGTATATGG AATCGAGGAG CACCCGCAAT GCAGCCTAA
 
Protein sequence
MSAFADRWIP KLVLAPSVAI AVVFIYGFIL ITGYLSLTRS RLLPNYEFDG FGRYTDLFQN 
DVWWTSAANL GWFGIPFIAI CVGLGLFLAI LLDQRIRNEG ALRAIFLYPM ALSFIVTGTA
WQWILNPGLG LEKVMHDWGW TSFSFGWLDD PDKAIFCVVI AAVWQSTGFV MALFLAGLRG
VDGEIFKAAQ VDGATLPIIY RKIVIPSMRP VFFSVLLILC HITIKTFDLV VALTAGGPGT
SSSLPAMFMY TFSFNRGQLG LGAASSVMML ATVVAVLVPL MYMESRSTRN AA