Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0915 |
Symbol | |
ID | 6122595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1013023 |
End bp | 1014159 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641637479 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001764214 |
Protein GI | 170732267 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.423978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTT GGTTATCGTG GCGTCCCACT GAGCAGCATG CGCAAATCGT GCGCAATTTG CTGCGTCGCG GGACGCGTGT CAGTCACCAT CTATTCAGCG TTGTCGGCTG TTTCGCTGTC GCGGTTGCGC TTGCACTGTG GCTGCTGCCA ACCGTCCGCG GCACGCTTGC CGCGAAGCTG ATGCCGGTCG TATCCGCGGC CGTGCAGGCC GGTCCGGCGC GTCTGCTGTC CGGCCATCCG CTGCCGAACT TCGCGCCTGC CGGTGCGCAG CCGCAGCAGG AAGACGGTCC CGAAACGGAT GCGCTGGCGG TCGGCCTCGA TGTCGCGCCG GAAACCGCCG CGCAGGGCGC TCAAGGCCCG CAGGGCGATG CGTCCGATCC GGCCCGCACC AGCCCGTCGC CGGTCGCACT GGCCAAGCTG ATTCCGATTC AGCGCGTGGC GGCCGATGCC CGCGACGATC GCGCGCTCGC GTCGAACCGC GAACAGGCGC TCGTCGCCAC TTATCTGTCG CGCCGTTACC GCGTCGCGCA GGAGCCGCTC GGCCAGCTCG TCAAGGCTGC GTTCCAGACC GGTCGTGACG TCGGCCTGGA TCCGCTGCTG CTGCTGTCCG TGATGGCGAT CGAATCGGGC TTCAACCCGT ACGCAGAAAG CGGCGTCGGC GCGAAGGGGC TGATGCAGGT CATGTCGAAG GTCCATTCCG ACAAGTTCGA GTATTTCGGC GGCACCGATA CCGCGCTGCA GCCGCTCGCG AACCTGCAGG TCGGCGCACT GGTGCTGAAG GATTGCATCG CGCGCGGCGG CTCGCTCGCG AACGGCCTGC GCCTGTACAA CGGCTCGACG AACCCCGACG ACAACGGCTA TGGCTCGAAG GTGATGGCCG AACGCGGTCG CTTGCGCGAC GTCGCGCGTG GCCGCAGCGT GCCGATCAAC GCGCCGCAGG CGCCCGCGCA GCCCGCGAAG CCGATCGTCA CCGCCGCTGC CGTGACGGCC GCGGCAGGCG GCGCGAAGCG CGTGCATGCG ACGCTCGACG GTACGACCTC GGTCAAGGCG GCGCCGAAGG AAGCCGCGTC GCAAGACGAC GCGAGCGTCG ATACCGCGAA GCAGTCGCAC GCCGATCATT CGGAGCTCGG CGCGTAA
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Protein sequence | MNAWLSWRPT EQHAQIVRNL LRRGTRVSHH LFSVVGCFAV AVALALWLLP TVRGTLAAKL MPVVSAAVQA GPARLLSGHP LPNFAPAGAQ PQQEDGPETD ALAVGLDVAP ETAAQGAQGP QGDASDPART SPSPVALAKL IPIQRVAADA RDDRALASNR EQALVATYLS RRYRVAQEPL GQLVKAAFQT GRDVGLDPLL LLSVMAIESG FNPYAESGVG AKGLMQVMSK VHSDKFEYFG GTDTALQPLA NLQVGALVLK DCIARGGSLA NGLRLYNGST NPDDNGYGSK VMAERGRLRD VARGRSVPIN APQAPAQPAK PIVTAAAVTA AAGGAKRVHA TLDGTTSVKA APKEAASQDD ASVDTAKQSH ADHSELGA
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