| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0903 |
|---|
| Symbol | |
|---|
| ID | 6122583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1002330 |
|---|
| End bp | 1003085 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641637467 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001764202 |
|---|
| Protein GI | 170732255 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.910889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGA CACAACGCAA GAAGGCGATC CTCGATGCGC TCGCGCGCGA CGGTCAGGTA
CTGGCCGCCG AGCTGAGCGT GCAATTCGGC GTGTCCGAAG ACACGGTGCG CCGCGACCTG
CGCGAGCTCG CGGCCGAAGG GCTGCTGCAG CGCGTGCATG GCGGCGCGCT GCCGGCGTCG
CCGGCCATCG CGCCGTTCGC GCAGCGCGAG GCGCTCGAAG CCACGGAGAA GCGGCGCATC
GCGCGGCGGG CCGCGCAGAT GATCGCGCCC GGCCAAGTGG CGATCGTCGA CGGCGGCACG
ACCTCCGCGC TGCTCGTCGG CCAGTTGCCG GCCGACCTGC GCGCGACGAT CGTCACGCAC
AGCCCGAGCG TCGCGGTCGC GCTGGCCGCC CATCCGTCGA TCGACGTGAT CCTGATCGGC
GGGCGGCTCT ACAAGCATTC GATCGTCGCG GTCGGCGCCG CGGCGATGGA AGGCATCGCG
CGCATTCATG CAGACCTGTA CTTCATGGGC GTCACGGGCG TCCATCCGGT AGCCGGCCTG
AGCACCGGCG ATTTCGAGGA AGCGGCGATC AAGCGCGCGC TGGTCGAACG CGCGGCCGAG
ACGGTCGTGC TCGCGTCGCA GTCGAAACTG CGCGCGGCAT CGCAATTCGT GATCGGTGAC
CTCACGCTGG CGCAGACGAT CGTCGTCGAG AAGGAAACCG ACGCCGCACT GACGAAGCCG
ATCGAGGCCG CGGGCGTGAC GGTGGTGCGC GCGTAG
|
|---|
| Protein sequence | MLTTQRKKAI LDALARDGQV LAAELSVQFG VSEDTVRRDL RELAAEGLLQ RVHGGALPAS
PAIAPFAQRE ALEATEKRRI ARRAAQMIAP GQVAIVDGGT TSALLVGQLP ADLRATIVTH
SPSVAVALAA HPSIDVILIG GRLYKHSIVA VGAAAMEGIA RIHADLYFMG VTGVHPVAGL
STGDFEEAAI KRALVERAAE TVVLASQSKL RAASQFVIGD LTLAQTIVVE KETDAALTKP
IEAAGVTVVR A
|
|---|
| |