| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0880 |
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| Symbol | |
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| ID | 6122561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 979725 |
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| End bp | 981032 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641637444 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001764180 |
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| Protein GI | 170732233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.824913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GCAGTCTGTT GAAGTTCGGT TCGATGGCCG GCGCGCTCGC GCTGGCGGGC
AAGAGCCCGT TCGCGCACGC GGCCGACGCG GGCACCGGCC CGATCAAGGT CGGCGTCCTG
CATTCGCTGT CGGGCACGAT GGCGATCTCG GAGACGTCGC TGAAGGACAC CGCGCTGATG
ACGATCGCCG ACATCAACAA GAGCGGCGGC GTGCTGGGCC GCAAGATCGA ACCGGTGGTG
GTCGATCCCG CGTCGAACTG GCCGCTGTTC GCCGAGAAGG CGCGCCAGCT GCTCACGCAG
GACAAGGTCG CGTGCGTGTT CGGCTGCTGG ACGTCGGTGT CGCGCAAGTC CGTGCTGCCG
GTGTTCGAGG AGCTGAACGG GCTGCTCTAT TACCCGGTGC AGTATGAAGG CGAGGAAATG
TCGCGCAACG TGTTCTACAC GGGCGCCGCG CCGAACCAGC AGGCGATTCC GGCCGTCGAG
TACCTGATGA GCGCGGAAGG CGGCGGCGCG AAGCGCTTCT TCCTGCTCGG CACCGACTAC
GTGTATCCGC GCACGACCAA CAAGATCCTG CGCGCGTTCC TGAAATCGAA GGGCGTGAAG
GACGCCGACA TTCAGGAGGT CTACACGCCG TTCGGCCACA GCGATTACCA GACCATCGTC
GCGAACATCA AGACCTTCTC GCAGGGCGGC AAGACGACCG TGGTCTCGAC GATCAACGGC
GACTCGAACG TGCCGTTCTA CAAGGAGCTC GGCAACCAGG GGATCAAGGC GACCGACGTG
CCGGTCGTCG CGTTCTCGGT CGGCGAGGAA GAGCTGCGCG GGATCGATAC GAAGCCACTC
GTCGGCCACC TCGCCGCGTG GAACTACTTC ATGTCGGTAA AGAACCCGAC CAACACGAAG
TTCAAGGACC AGTTCGCCGC GTGGGTGAAG GCGAACAACC TGCCGGGCGG CGCGAAGCGC
GTGACCAACG ATCCGATGGA AGCGACCTAC GTCGGCATTC ACATGTGGAA GCAGGCCGTC
GAGAAGGCGA AGAGCACCGA CGTCGACAAG GTGCGCGTCG CGATGATCGG CCAGACGGTC
GCCGCACCGT CGGGCTTCAC GCTCGCGATG GACGGCAACC ATCACCTGCA CAAGCCGGTG
ATGATCGGCG AGATCCGCGG CGACGGGCAG TTCAACGTCG TGTGGAAGAC CAAGACGGCC
GTGCGTGCGC AGCCGTGGAG CCCGTTCATC GCGGGCAACC AGGGCAAGCC GGACGTCGTC
AGCTCGATTC CGGCGTTCCT GCGCCGGCAG CGCGCGGCGC TGGCCTGA
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| Protein sequence | MKRRSLLKFG SMAGALALAG KSPFAHAADA GTGPIKVGVL HSLSGTMAIS ETSLKDTALM
TIADINKSGG VLGRKIEPVV VDPASNWPLF AEKARQLLTQ DKVACVFGCW TSVSRKSVLP
VFEELNGLLY YPVQYEGEEM SRNVFYTGAA PNQQAIPAVE YLMSAEGGGA KRFFLLGTDY
VYPRTTNKIL RAFLKSKGVK DADIQEVYTP FGHSDYQTIV ANIKTFSQGG KTTVVSTING
DSNVPFYKEL GNQGIKATDV PVVAFSVGEE ELRGIDTKPL VGHLAAWNYF MSVKNPTNTK
FKDQFAAWVK ANNLPGGAKR VTNDPMEATY VGIHMWKQAV EKAKSTDVDK VRVAMIGQTV
AAPSGFTLAM DGNHHLHKPV MIGEIRGDGQ FNVVWKTKTA VRAQPWSPFI AGNQGKPDVV
SSIPAFLRRQ RAALA
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