Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0878 |
Symbol | |
ID | 6122559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 976768 |
End bp | 977955 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637442 |
Product | urea ABC transporter, permease protein UrtC |
Protein accession | YP_001764178 |
Protein GI | 170732231 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTTCAT ACACCGATTC GATGTCGAAC CCGGTCGCCG ACGCGTCGAA GCCCGCTGCC GCCGCACGCG CGGCGGACGG CTTCGCGCTC GGCCTGCCGC CCCGCCCCGC GCTGCTGTCG CGCCGCGCGT GGCTCGCGCT CGTCGCGCTG TGCGTGGCGA TCGGCATCGG CGTGCCGCTC GCCGCGCTGG TTGCGCCCGA AGCCAGCGCG TTCCATCTGT CCGCGTACAC GATGACGCTC GCCGGCAAGC TGATGTGCTA CGCGATCGCC GCGCTCGCGC TCGATCTCGT GTGGGGCTAC TGCGGCATCC TGAGCCTCGG TCACGGCCTG TTCTTCGCGC TCGGCGGCTA TGCGATCGGC ATGTACCTGA TGCGCGAGAT CGGCCGCGAC GGCAAGTACG GCAGCGACCT GCCCGACTTC ATGGTGTTTC TCGACTGGCA CCAGTTGCCG TGGTACTGGA ACGGCACGCA GCATCTCGCG TGGGCGCTCG CGCTGGTCGT GCTCGTGCCG GCCGTGCTCG CGTGGGTGTT CGGCTTCTTC ACGTTCCGCT CGCGCGTGAA GGGCGTGTAC CTGTCGATCA TCACGCAGGC CATGACGTTC GCCGCGATGC TGCTGTTCTA TCGCAACGAG ACGGGCTTCG GCGGCAACAA CGGCTTCACC GATTTCAAGC GCATCGCCGG CTTCGCGATC ACGTCGCCGG GCACGCGCAC GGTGCTGTTG CTGCTGACGT TCGCGACGCT CGTGCTCGCG TTCATCGCCG CGCGCGCGAT CGTCACGAGC AAGCTCGGGC GCGTGGTGAC CGCGGTGCGC GACGGCGAGA CGCGGCTGAT GTTCCTCGGC TACAGCCCGC TCGCGTACAA GCTGTTCGTG TGGACCGTGT CGGCCGTGCT GTGCGGCATC GCCGGCGCGC TATACGTGCC GCAGGTCGGC ATCATCAATC CCGGCGAGAT GTCGCCCGGC AACTCGATCG AAATGGCGAT CTGGGTCGCG GTGGGCGGGC GCGGCACGCT GATCGGGCCG ATCGTCGGCG CGTTCGCGGT GAACGGCGCG AAGAGTTTCT TCACCGCGTA CTTCGCCGAA TACTGGCTGT TCTTCCTCGG CCTGATCTTC GTGCTCGTGC CGCTCCTGCT GCCGCGCGGG ATCATGGGCC TCGTCGAAAC CGTGCTCGCG AAGGGGAAAC GCGCATGA
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Protein sequence | MTSYTDSMSN PVADASKPAA AARAADGFAL GLPPRPALLS RRAWLALVAL CVAIGIGVPL AALVAPEASA FHLSAYTMTL AGKLMCYAIA ALALDLVWGY CGILSLGHGL FFALGGYAIG MYLMREIGRD GKYGSDLPDF MVFLDWHQLP WYWNGTQHLA WALALVVLVP AVLAWVFGFF TFRSRVKGVY LSIITQAMTF AAMLLFYRNE TGFGGNNGFT DFKRIAGFAI TSPGTRTVLL LLTFATLVLA FIAARAIVTS KLGRVVTAVR DGETRLMFLG YSPLAYKLFV WTVSAVLCGI AGALYVPQVG IINPGEMSPG NSIEMAIWVA VGGRGTLIGP IVGAFAVNGA KSFFTAYFAE YWLFFLGLIF VLVPLLLPRG IMGLVETVLA KGKRA
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