| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0857 |
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| Symbol | |
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| ID | 6122538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 954981 |
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| End bp | 956864 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641637421 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001764157 |
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| Protein GI | 170732210 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGAT CCAGAGCATC TTGGCTGTCC CTGAGTGCTT TCCTGTTCGA CCTGACGGCG
GTTGTCGCCG CATGGTTGTT CGCTTATCTC GTTCGTTTCA ACGGCAGCGT TCCGCATGAT
TTCCTGAGCG GCGCGCTGAT GGCGCTGACG TGGGCACTGC CCGTCTATGC GCTGATGTTC
CGCGGCTTCG GCCTGTATCG CGGGCTGTGG GTGTTCGCCA GCCTGCCCGA TCTGATGCGC
ATCGCGAAGG CGGTGGCCGG CGGCGGCGTG ATCGTGATGA TCGGCGCGGT GATGTTCCAG
CCGCAGCCGA TCATTCCGCG CTCGGTGCTG CTCGTGTCGC CGTTGATGCT GTTCCTGGCA
ATGGGCGGCG CCCGCGCGCT GTATCGCGCG ACGAAGGAGT ACTACCTGTA CGGTGGGCTC
GTCGGCAAGG GCAAGCCGGT GCTGGTGCTG GGTGCCGGCA CGGCCGGCGC GAGCCTCGCG
CGCGAACTGT CGCGCTCCGG TGAATGGCGC TTGGTCGGCC TGCTCGACGA CGACGTCACG
AAACAGGGCC GAGAAATCTA CGGCTACAAG GTGCTCGGCT CGTTCAACGA CCTCAAGCAC
TGGACCGATG CGATGAAGGT CGAATACGCG ATCATCGCGA TTCCGTCGGC GTCGGTCGAA
ACACAGCGTC GCGTCGCGAC CCTGTGCGTG CGGGCCGGCG TGAAGGCGAT GGTGCTGCCT
TCGCTGACCG CACTGATGCC GGGGCAGGGC TTCCTGTCGC AGGTACGGAA CATCGATCTC
GAGGATCTGC TCGGCCGCGA CGCGGTGACG ATCGATACGC CGCACGTCGA AGCGCTGCTG
CGCGGCCGCG TCGTGATGGT GACCGGCGCG GGCGGCTCGA TCGGCTCCGA GTTGTGCCGG
CAGATCCTGC GCTTCGCCCC TGCGCAGCTC GTTGCATTCG ATCTCTCGGA ATACGCGATG
TACCGGCTGA CCGAGGAATT GCGTGAGCGT TTTCCGGATC TGCCCGTGGT GCCGATCATC
GGCGATGCGA AGGATTCGCT GCTGCTCGAC CAGGTGATGT CGCGTCACGC GCCGCACATC
GTGTTCCATG CGGCCGCCTA CAAGCACGTG CCGTTGATGG AAGAGCACAA CGCATGGCAG
GCGCTGCGCA ACAACGTGCT CGGCACCTAT CGCGTGGCGC GGGCGGCGAT CCGCCACGAC
GTGCGTCACT TCGTGTTGAT CTCGACCGAC AAGGCGGTCA ATCCGACCAA CGTGATGGGC
GCGAGCAAGC GTCTCGCCGA AATGGCCTGC CAGGCGTTGC AGCAGTCGAG CGGGCGTACG
CAGTTCGAGA CGGTGCGCTT CGGCAATGTG CTCGGCAGCG CGGGCAGTGT GATTCCGAAG
TTTCAACAGC AGATCGCGAA GGGTGGCCCG GTGACGGTTA CGCACCCGGA GATCACGCGT
TTCTTCATGA CGATCCCGGA AGCGTCGCAG CTCGTGCTGC AGGCATCGAG CATGGGGCAT
GGCGGCGAGA TCTTCATTCT CGACATGGGC GAGCCGGTGA AGATCGTCGA TCTCGCGTGC
GACCTGATCC GCCTGTACGG TTTCTCGGAA GAACAGATCC GCATCGAGTT CACCGGGCTG
CGGCCGGGCG AGAAGCTCTA CGAGGAGTTG CTCGCTGACG ACGAGGCGAC GACGCGTACG
CCGCACCCGA AGCTGCGGAT CGCACGTGCG CGCGAAGTGC CGGACAATTT CCTCGACGAA
TTGCTGCCGT GGCTGATGCA GCATCGCGTG CTGTCCGACG ACGAGGTGCG GCGCGATCTG
CGGCGCTGGG TGCCGGAATA CCAGACGGCC GTTGCCCCCG TGTTGCAGAG CGTGCCGTCG
GTGCGCGTCG TATCGAACGG GTGA
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| Protein sequence | MLRSRASWLS LSAFLFDLTA VVAAWLFAYL VRFNGSVPHD FLSGALMALT WALPVYALMF
RGFGLYRGLW VFASLPDLMR IAKAVAGGGV IVMIGAVMFQ PQPIIPRSVL LVSPLMLFLA
MGGARALYRA TKEYYLYGGL VGKGKPVLVL GAGTAGASLA RELSRSGEWR LVGLLDDDVT
KQGREIYGYK VLGSFNDLKH WTDAMKVEYA IIAIPSASVE TQRRVATLCV RAGVKAMVLP
SLTALMPGQG FLSQVRNIDL EDLLGRDAVT IDTPHVEALL RGRVVMVTGA GGSIGSELCR
QILRFAPAQL VAFDLSEYAM YRLTEELRER FPDLPVVPII GDAKDSLLLD QVMSRHAPHI
VFHAAAYKHV PLMEEHNAWQ ALRNNVLGTY RVARAAIRHD VRHFVLISTD KAVNPTNVMG
ASKRLAEMAC QALQQSSGRT QFETVRFGNV LGSAGSVIPK FQQQIAKGGP VTVTHPEITR
FFMTIPEASQ LVLQASSMGH GGEIFILDMG EPVKIVDLAC DLIRLYGFSE EQIRIEFTGL
RPGEKLYEEL LADDEATTRT PHPKLRIARA REVPDNFLDE LLPWLMQHRV LSDDEVRRDL
RRWVPEYQTA VAPVLQSVPS VRVVSNG
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