| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0846 |
|---|
| Symbol | |
|---|
| ID | 6122527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 938441 |
|---|
| End bp | 939340 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641637410 |
|---|
| Product | rhamnosyltransferase |
|---|
| Protein accession | YP_001764146 |
|---|
| Protein GI | 170732199 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | [TIGR01556] L-rhamnosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0700283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATCAGA ATTCCGCGGT GCAGGAGCAG ACCGGTGTCG TGATCGTGTT CTACCGGCCG
GATAGCGGTT GCGTAGCCCG TGCGAACCGG CTCGCCAAAG TATGGCCATG CGTGGTGGTG
GACAACACGG AGAGCATCAG TGCGCCGGAA GCGCTCGGGC TCGACGCGCG TATCGACTAT
GTCGCGAACG GCGCCAATCT TGGCATCGCG ACGGCGCTCA ACCAGGGCAT CGAACGGCTG
GCCGCGGCGA ACTGTACGTC GGTATTGCTG TTCGATCAGG ATAGCGAGCC GTCAGACGAA
TTGCTGGTCG AACTGCCTCG GACAATGGCG GCCGAGCGCA TGCGTAATCG TCGCGTGGCG
CTCGTCGGCC CCGCGTACGA GGATGCGCGA TTGGGCGGCG TCGCGCCGTT CGTCCGCTTC
GGGTACGTGA AGTTGCGCCG GGTTCAGCCG GACGGTGTGC AACCGGTCGA GGTCGACTTT
CTGATTACGT CGGGATCGTG CGTGAATCTC GCTGTATGGC GCGACATCGG GCCGATGGAC
GATTCGCTGT TCATCGACTT CGTCGATCTC GAATGGTGTG TCCGCGCACG CTCGAAGGGG
TATTCGGTGC TCGGCGCGCC GGCGTTGCGG TTGAAGCACG AACTGGGCGG CGAGCCGGTG
AGGGTGTTCG GGCGGAGCTA CCCGGGGCAC AGCGCGGTTC GGCACTACTA TCTGTTCCGC
AACGCGATCG CGCTGATCCG GCGTTCCTAC GTACCCTGGA GCTGGAAGTC GACCGAACTG
GTCAAGATGC CGGTCCGGCT TGCGATCTAC GCGTTGTTCA TGCAGCCGCG CGTGGCGCAC
CTGCGGCTCT CATTGCTCGG CATCTGGCAC GGACTGACCG GGCGCTCGGG GGAGCTGTAA
|
|---|
| Protein sequence | MNQNSAVQEQ TGVVIVFYRP DSGCVARANR LAKVWPCVVV DNTESISAPE ALGLDARIDY
VANGANLGIA TALNQGIERL AAANCTSVLL FDQDSEPSDE LLVELPRTMA AERMRNRRVA
LVGPAYEDAR LGGVAPFVRF GYVKLRRVQP DGVQPVEVDF LITSGSCVNL AVWRDIGPMD
DSLFIDFVDL EWCVRARSKG YSVLGAPALR LKHELGGEPV RVFGRSYPGH SAVRHYYLFR
NAIALIRRSY VPWSWKSTEL VKMPVRLAIY ALFMQPRVAH LRLSLLGIWH GLTGRSGEL
|
|---|
| |