Gene Bcenmc03_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0842 
Symbol 
ID6122523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp935045 
End bp936106 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID641637406 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001764142 
Protein GI170732195 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0136971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGG TTACGGGCGG CGCGGGTTTT ATCGGTGCCA ATTTTGTACT CGACTGGCTG 
CGCGCATCCG ACGAAGCCGT GCTCAACGTT GACAAGCTGA CGTATGCAGG GAACCTGCGC
ACGCTGCAGT CGCTGGACGG AAACCCGAAG CACGTGTTCG CGCGCGTCGA CATCTGCGAC
CGTGACGCAC TTGACGCGCT CCTGGCCGAG CACAAGCCCC GCGCGGTGCT GCACTTCGCC
GCGGAAAGCC ACGTCGATCG CTCGATCCAC GGTCCCGCGG ACTTCGTGCA GACCAACGTC
GTCGGCACGT TCACGCTGCT CGAGGCCACC CGTCAGTACT GGAACGGCCT GAACGACGCC
GACAAGGCCG CGTTCCGCTT CCTGCACGTG TCGACCGACG AGGTGTTCGG TTCGCTGTCG
GCTACCGACC CGCAATTCTC GGAGACGACG CCGTACGCGC CGAACAGCCC GTATTCCGCG
ACGAAGGCGG GCTCCGACCA CCTGGTGCGC GCGTACCATC ATACGTATGG CCTGCCGGTG
CTGACGACGA ACTGTTCGAA CAACTACGGC CCGTACCAGT TCCCGGAAAA GCTGATCCCG
CTGATGATCG CGAACGCGCT CGCGGGCAAG CCGCTGCCGG TGTATGGCGA CGGCCAGAAC
GTGCGCGACT GGCTGTACGT CGGCGACCAC TGCAGCGCGA TCCGCGAAGT GCTCGCGCGC
GGCGTACCGG GCGAGACGTA CAACGTCGGC GGCTGGAACG AGAAGAAGAA CCTCGAAGTC
GTGCATACGC TGTGCGACCT GCTCGACAAG GCGCGCCCGA AGGCAGCGGG TTCGTACCGT
GACCAGATCA CCTATGTGAC CGACCGGCCC GGCCACGATC GCCGCTACGC GATCGATGCG
CGCAAGCTCG AACGCGAACT CGGCTGGAAG CCCGCGGAAA CGTTCGAGAC CGGCCTGGCA
AAGACGGTCG ACTGGTATCT CGACAACCAG GTGTGGGCCG ATGAGGTCGC ATCGGGCGAG
TACCGCAAGT GGGTCGAGAC GAACTACGCG AAACGCACTT GA
 
Protein sequence
MILVTGGAGF IGANFVLDWL RASDEAVLNV DKLTYAGNLR TLQSLDGNPK HVFARVDICD 
RDALDALLAE HKPRAVLHFA AESHVDRSIH GPADFVQTNV VGTFTLLEAT RQYWNGLNDA
DKAAFRFLHV STDEVFGSLS ATDPQFSETT PYAPNSPYSA TKAGSDHLVR AYHHTYGLPV
LTTNCSNNYG PYQFPEKLIP LMIANALAGK PLPVYGDGQN VRDWLYVGDH CSAIREVLAR
GVPGETYNVG GWNEKKNLEV VHTLCDLLDK ARPKAAGSYR DQITYVTDRP GHDRRYAIDA
RKLERELGWK PAETFETGLA KTVDWYLDNQ VWADEVASGE YRKWVETNYA KRT