| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0810 |
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| Symbol | |
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| ID | 6122491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 900574 |
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| End bp | 902016 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641637374 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001764110 |
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| Protein GI | 170732163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.347911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTG CCCGCCCTCG CCCGCCGCGC CGCATCCTCG CCCGCTTCGT CGCCGTCTCG
TGGCGCGACC TCGCGCTGTC GATCGGCCCG ACCGTGCTGC TCGCCGGCGC GGCCGTCTGG
CTCGCGGTCA AGCTGATCCA GCCGGCGCCG CCGTCCACGC TCGTGATCTC GTCCGGGCCG
CCCGGCAGCA CGTACTGGAA CGCCGCACAG AAGTACAAGA CGATTCTCGC TAAAAACGGC
GTCACGCTCA ACGTTCAATC GTCCGAAGGT TCCGCGCAGA ACCTCGCGCG GCTGTCCAAT
CCGAACGCGC CGGTCGACGT CGGATTCGTG CAGAGCGGCA TCGGCCCGAA GGAGCGCGAC
GAGCATCTCG CGTCGCTCGG CAGCATCGGC TACGTGCCGC TCGCGATCAT GTACCGCGGC
CCGGTCGTCG CGCGCCTGTC CGACTTCAAG GGCAAGCGGC TCGCGCTCGG TGCGGAAGGC
AGCGGCGCGC GCGAACTGAG CCTCGCGCTG CTGAAGATGA ACGGCATCGT GCCGGGCGGC
CCGACCGCGC TCCTGCCGAC CGCCGGCGAG GACGCGGCGA CCGCGCTGCT CGACGGCAAG
ATCGACGCGG CCTTCCTATC CGGCGATTCG ACGCAGATTC CGGTGATGGC GAAGCTGTTC
CGCGCGCCGG GCGTGCACGT GTATTCGTTC ACGCAGGCCG AGGCGTACGC GCGGCGCTTT
CCGTACCTGA CCGCGATCAC GCTGCCGATG GGCGTCTACG ATCTCGGCCT CAATCTGCCG
CCCGCCGATA TCCACACGGT CGCGCCGACG ATCGAACTCG TCGCGCGCGA CTCGCTGCAC
CCCGCGCTGT CCGACCTGCT GATCGAGGCC GCGCGCGAAG TGCACGGCCA CGCGACGATC
CTGCAGCACG CGGGCGAATT CCCGTCGCCG GTCACGCGCG GCTTCCCGCT GTCCGACGAC
GCGTCGCGCT ATTACAAGTC GGGCAAGACC TTCCTGTACC GGCGGCTGCC GTTCTGGGTC
GCGAGCCTGG TCGACCGGCT GCTGGTCGTG CTGGTACCGC TGATCGTCGT GCTGATTCCC
GGGCTGCGGC TCGTGCCGTC ACTGTACGGC TGGCGCGTGC GCTCGCGCAT CTACCGCTGG
TACGGCGCGC TGATCGCGCT CGAACGCAGC GCGCTCGGCG ACCATACGGC CGAGGAGCGC
GTGCAGTTGC TCGACCAGCT CGACGACATC GAGGAAGCCG TGAACCGGAT GAAGATGCCG
CTCGCGTACG CCGGTCAGTT CTACGTACTG CGCGAGCACA TCGGCTTCGT GCGCGAACGG
CTCACCGCGC ACGACCAGGA TGCGCCGGCG GGCCCGCCCA GCGCCGGCAG CCCGCCGGCA
CGCGCGCAAG CCGCGCCGCC GCCGGCTGGC GACGCCCCCC GGGCGACTCC CGGTTCCGCG
TGA
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| Protein sequence | MKPARPRPPR RILARFVAVS WRDLALSIGP TVLLAGAAVW LAVKLIQPAP PSTLVISSGP
PGSTYWNAAQ KYKTILAKNG VTLNVQSSEG SAQNLARLSN PNAPVDVGFV QSGIGPKERD
EHLASLGSIG YVPLAIMYRG PVVARLSDFK GKRLALGAEG SGARELSLAL LKMNGIVPGG
PTALLPTAGE DAATALLDGK IDAAFLSGDS TQIPVMAKLF RAPGVHVYSF TQAEAYARRF
PYLTAITLPM GVYDLGLNLP PADIHTVAPT IELVARDSLH PALSDLLIEA AREVHGHATI
LQHAGEFPSP VTRGFPLSDD ASRYYKSGKT FLYRRLPFWV ASLVDRLLVV LVPLIVVLIP
GLRLVPSLYG WRVRSRIYRW YGALIALERS ALGDHTAEER VQLLDQLDDI EEAVNRMKMP
LAYAGQFYVL REHIGFVRER LTAHDQDAPA GPPSAGSPPA RAQAAPPPAG DAPRATPGSA
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