Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0791 |
Symbol | |
ID | 6122472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 878383 |
End bp | 879750 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641637355 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001764091 |
Protein GI | 170732144 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.589173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGC GACAGGCAAT GCGTCAGATG CCCGTGCGAG CGGGGCGAGC GGGAAGCACA CGCGGTGAAG CTGCGTCTAT GCCCGTGAGC GATGAAGGCT GTTGCCCGCG CCATGAATCC GGGGACACGG GGTCATCGCT GCTGATGGCG GCGCTGACGA GGGAGAACCT GAAGCAGGCG TTCAAACGGG TACGGGCCAA CAAGGGAGCC GCTGGCGTGG ACGGTCTGGA TATTGACCAG ACGTCGCGCC ATCTGGTGAC GGCGTGGCCC GCGATCCGTG AACAGTTGCT GAAGGGGACG TACCGGCCCA GTCCGGTACG GCGGGTGACG ATCCCGAAAC CGGACGGAGG CGAGCGCGAG CTTGGCATCC CGACGGTGAC GGACCGGCTG ATCCAGCAAG CGTTGCTGCA GGTGCTGCAA CCGGTTCTGG ACCCTGGCTT CAGCGAGCAC AGCTACGGCT TCCGGCCTGG ACGGCGTGCG CACGATGCGG TGCTTGCCGC GCAGTCGTAC GTGCAGTCGG GTCGGCGAAT CGTGGTGGAT GTTGATCTGG AGAAGTTCTT CGACCGGGTC AACCACGACA TCCTGATCGA CCGACTGCAG AAACGTACTG GGGACGCCAG CGTGATCCGG CTGATCCGGG CGTATCTGAA CAGCGGCATC ATGGATGGCG GCGTGGTTCA GCAGCGCGAA CAGGGCACGC CACAGGGCGG GCCGCTATCG CCGTTGCTGG CCAACGTGTT GCTCGATGAG GTGGACAAGG AACTGGAGCG GCGAGGCCAC TGCTTCGCGC GCTATGCCGA CGATGCGAAT GTCTATGTTC GTAGCCGCCG TGCTGGCGAG CGGGTGATGG CGCTGCTGCG TCGTCTGTAT GGGCAACTGC GGTTGAAGGT CAACGAGACC AAAAGCGCAG TCGCCAGTGT GTTCGGTCGC AAGTTTCTGG GCTACAGCCT ATGGGTAGCG TCCGGCGGTG TCATCAAGCG CAAGGTGGCG GCCAGAGCGC TGCTGGCGTT CAAACGCCGC ATTCGTGAAC TGACCGGCCG TAGCGGCGGG CGCAGCATGA AGGACGTGGT GGAACGGTTA CGGCCCTATG TATTGGGCTG GAAGGCGTAC TTCCGGATGG CGCAGACGCC ACGAGTCTGG CTGGATCTGG ACAAGTGGAT GCGTCATCGG CTGCGTGTCA TCCAGCTCAA ACACTGGCGC CGCGGTCCGA CCATCTACCG GGAACTGCGT GCGCTGGGCG CACCGTCCGC TGTGGCGCAA CAGGTGGCGG CGAATAGCTG CCGCTGGTGG CGTAACAGCG GCAAGCTCCT GAATAGCGTA TTGACCCTCG CGTACTTCGA TCGGCTGGGT GTGCCCCGAC TCTCATAA
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Protein sequence | MSMRQAMRQM PVRAGRAGST RGEAASMPVS DEGCCPRHES GDTGSSLLMA ALTRENLKQA FKRVRANKGA AGVDGLDIDQ TSRHLVTAWP AIREQLLKGT YRPSPVRRVT IPKPDGGERE LGIPTVTDRL IQQALLQVLQ PVLDPGFSEH SYGFRPGRRA HDAVLAAQSY VQSGRRIVVD VDLEKFFDRV NHDILIDRLQ KRTGDASVIR LIRAYLNSGI MDGGVVQQRE QGTPQGGPLS PLLANVLLDE VDKELERRGH CFARYADDAN VYVRSRRAGE RVMALLRRLY GQLRLKVNET KSAVASVFGR KFLGYSLWVA SGGVIKRKVA ARALLAFKRR IRELTGRSGG RSMKDVVERL RPYVLGWKAY FRMAQTPRVW LDLDKWMRHR LRVIQLKHWR RGPTIYRELR ALGAPSAVAQ QVAANSCRWW RNSGKLLNSV LTLAYFDRLG VPRLS
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