Gene Bcenmc03_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0788 
Symbol 
ID6122469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp873874 
End bp875235 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content70% 
IMG OID641637352 
Productmajor facilitator transporter 
Protein accessionYP_001764088 
Protein GI170732141 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CGCCGGCCGA TACGCGCGTG CTCGAAGTCG AGCGCGTGAT CGACGAAACC 
CATCGCCCGG GTTTTCACTG GATGCTGCTC GCGCTGTGCG GGCTGTGTCT CGTGATCGAC
GGTTTCGATG CGCAGGCGAT GGGCTACGTC GCGCCGAGCG TGATCGCCGA ATGGGGTGTG
CCGAAGCAGG CGCTCGGGCC CGTGTTCAGC GCGAGCCTGT TCGGGATGCT GCTCGGCGCG
CTCGGGCTGT CGGTGCTGGC CGACCGGATC GGGCGGCGCC CGGTGCTGAT CGGCTCGACG
CTGTTCTTCG CGGTGACGAT GCTCGCGACG CCGTTCGCGG GCTCGATCCC CGTGCTGATG
GCGCTGCGCT TCGTCACCGG TCTCGGCCTC GGCTGCATCA TGCCGAACGC GATGGCGCTG
GTCGGCGAGT TCAGCCCTGC CGCGCATCGC GTGAAGCGGA TGATGATCGT GTCGTGCGGC
TTCACGCTCG GCGCGGCGAT CGGCGGCTTC ATCAGCGCGG CGCTGATTCC GGCGCTCGGC
TGGCGTTCGG TGTTCTTCGT CGGCGGCGCG GCGCCGCTCG TGCTGACGAT CGCGATGCTC
GCGCGGCTGC CCGAATCGCT GCAGTTCCTG GTGCTGAAAG GGCGCGTCGC GCAGGCGCGC
GACTGGCTCG CGCGGTTCGC ACCGGAAGCC GGCATCGATG CGGATACGCG GCTCGTCGTG
CGCGAGCGCG CGGCGAGCGG CGCGCCGGTG GCCGAACTGT TCCGCCATGG CCGCCTGCCG
GTCACGCTGC TGCTGTGGGC GATCAGCTTC ATGAACCTGA TCGATCTGTA CTTCCTGTCG
AACTGGCTGC CGACCGTGAT GCGCGAAGCC GGCTATTCGC CGGGCACGGC GGTGATCGTC
GGCACGGTGC TGCAGACGGG TGGCGTGATC GGCACGCTGT CGCTCGGCTG GTTCATCGAA
CGTTACGGCT TCGTGCGCGT GCTGTTCGCC TGCTTCGCGT GCGCGGCCGT GTCGGTGGGG
CTGATCGGCT CGGTCGCGCA TGCGCTGCCG TGGCTGCTGG TCGTCGTGTT CGCGGGCGGG
TTCTGCGTGG TCGGCGGGCA GCCGGCCGTG AACGCGCTCG CGGGCCAGTA TTACCCGACG
TCGCTGCGCT CGACGGGCAT CGGCTGGAGC CTCGGCATCG GCCGGATCGG CTCGGTGCTC
GGGCCGCTCG TCGGCGGGCA ACTGATTGCG CTCAACTGGT CCAACGGCGC GCTGTTCCAC
GCGGCCGCGG TGCCCGTGCT GTGCTCGGCG CTGTTCGTCC TCGGGCTGGC GGGTGTGACG
CGGCGCAGCG GCACGCAGGC GCCGAACGCC GCCCTGAATT GA
 
Protein sequence
MSAAPADTRV LEVERVIDET HRPGFHWMLL ALCGLCLVID GFDAQAMGYV APSVIAEWGV 
PKQALGPVFS ASLFGMLLGA LGLSVLADRI GRRPVLIGST LFFAVTMLAT PFAGSIPVLM
ALRFVTGLGL GCIMPNAMAL VGEFSPAAHR VKRMMIVSCG FTLGAAIGGF ISAALIPALG
WRSVFFVGGA APLVLTIAML ARLPESLQFL VLKGRVAQAR DWLARFAPEA GIDADTRLVV
RERAASGAPV AELFRHGRLP VTLLLWAISF MNLIDLYFLS NWLPTVMREA GYSPGTAVIV
GTVLQTGGVI GTLSLGWFIE RYGFVRVLFA CFACAAVSVG LIGSVAHALP WLLVVVFAGG
FCVVGGQPAV NALAGQYYPT SLRSTGIGWS LGIGRIGSVL GPLVGGQLIA LNWSNGALFH
AAAVPVLCSA LFVLGLAGVT RRSGTQAPNA ALN