Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0769 |
Symbol | tolB |
ID | 6122450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 857672 |
End bp | 858967 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641637333 |
Product | translocation protein TolB |
Protein accession | YP_001764069 |
Protein GI | 170732122 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.103724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTGA TGACAAAGCT AGGTTTCAGG GCACTCGTGG CCTCGTGTCT GATTACGGCG GGCAGCGCCG CTAACGCCCA GGTCAACGTG CTGATCACCG GTGTCGGGTC GACCCAGTTC CCCATTGCCA CCGCGAACTT CACGAACGAG GCGAATCTGC CGCAGCAGAT CACGTCGATC GTGCGCGCCG ACCTTGCCCG CAGCGGCAAA TTCACCAACA TCGACGCGGG CAGCACGCCC GTGCCCGAGA CCGCCTCGGT CGATCTCGGC GCATGGAAGG CCAAGGGCGC GAATGCGTTC GTCGCCGGCA GCGTGAACCG CGACGCGAAC GGTCAGTACA AGGTCAACTT CATCCTGTAC GACACCGTGA AGCAGCAAAG CCTCGGCGGC CTGTCGCTGA CGGCCACCGA CACCACGCTG CGCACGGCCG GCCACAAGAT CGCCGACTAC ATCTATCAGA AGCTGCTCGG CGTGCGCGGC GTATTCGCCA CGCGCTTGTC GTACGTGATC AAGACCGGCA ACCGCTACCA GTTGCAGATT TCGGATTCGG ATGGCCAGAA CGCGCGCATC GCGCTGTCGA GCACCGAGCC GATCATCTCG CCGGCCTGGT CGCCGAGCGG CACGAAGGTC GCGTACGTAT CGTTCGAGCG CAAGAAGCCG ATCGTCTACA TCCATGACTT GCCGACCGGC CGCCGCTACA TGGTCTCCGA CCAGAAGGGC AACAACAGCG CACCGGCGTG GTCGCCGGAC AGCAACACGC TGGCCGTCGC GCTGTCGCTG ACGGGCAATA CGCAAATCTA CACGGTCAAC GCGAACGGCG GCGGCCTGCG CCGTCTCACG CAGAGCAGCT CGATCGACAC CGAACCGTTC TACTCGCCGG ACGGTCGTTG GATCTACTTC ACGAGCGATC GTGGCGGTGC GCCGCAAATC TACCGGATGC CCGCGCAGGG TGAAAGCGCC GGCGCCGCGC AGCGCGTGAC CTTCACCGGC AGCTACAACA CGAGCCCGCG CGTGAGCCCG GACGGCAAGC TGCTCGCTTA CATCTCCCGC ACGGGTGGGG GCTTCAAGCT GTACGTTCAG GATCTGCAGA CTGGCGCGGC GAACGCCATC ACGAATACCA ATCGCGACGA ATCGCCGAGC TTCGCGGCAA ACGGCCAGTA CCTTCTGTAC GCTACCCAGT CGGGTGGTCG CAACGTTCTG GCTGCAGTGC CCTCCGACGG CAGCGCGCCG CCGCAGATCC TGTCCGTCCA GGGCGGCTCC GTTCGCGAGC CGTCGTGGGG GCCCTTCATG CAATGA
|
Protein sequence | MSLMTKLGFR ALVASCLITA GSAANAQVNV LITGVGSTQF PIATANFTNE ANLPQQITSI VRADLARSGK FTNIDAGSTP VPETASVDLG AWKAKGANAF VAGSVNRDAN GQYKVNFILY DTVKQQSLGG LSLTATDTTL RTAGHKIADY IYQKLLGVRG VFATRLSYVI KTGNRYQLQI SDSDGQNARI ALSSTEPIIS PAWSPSGTKV AYVSFERKKP IVYIHDLPTG RRYMVSDQKG NNSAPAWSPD SNTLAVALSL TGNTQIYTVN ANGGGLRRLT QSSSIDTEPF YSPDGRWIYF TSDRGGAPQI YRMPAQGESA GAAQRVTFTG SYNTSPRVSP DGKLLAYISR TGGGFKLYVQ DLQTGAANAI TNTNRDESPS FAANGQYLLY ATQSGGRNVL AAVPSDGSAP PQILSVQGGS VREPSWGPFM Q
|
| |