| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0678 |
|---|
| Symbol | |
|---|
| ID | 6122359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 743492 |
|---|
| End bp | 745111 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763978 |
|---|
| Protein GI | 170732031 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3008] Paraquat-inducible protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0419217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTC CACAAGGCCC GCAGCACGAC GCGCCCCGAC CGCCCGATCC GGCGATCTCG
ACGAAAAGCG GCTGGCTGCC GTCGCTCGTC TGGCTCGTGC CGCTGATCGC CGCGCTGATC
GGCATCGGCC TCGTGATCAA GTCCGTGCGC GAGCGCGGCC CGGAAATCAC GATCAGCTTC
CACAGCGCCG AAGGGCTCGA GCCGGGCAAG ACCCAGGTCA AGTACAAGGA CGTCGAGATC
GGCACGGTCA AGACGATCAA GCTGTCGAAG GACCTGTCGC GCGTGCTGGT CCAGGTGCAG
CTCAAGAAGG AAGCGGAAGA CTTCGCGGTC CAGGGCTCGC GCTTCTGGAT CGTGCGGCCG
CGCGTCGGCG CGACCGGCGT ATCGGGGCTC GGCACGCTGC TGTCCGGCGC GTACATCGGC
GTCGACGCCG GCCACGGCCA GGACACGCTG ACCGACTTCA CGGGCCTCGA AACGCCGCCC
GCCGTCACGG GCGACCAGAA AGGCACGCAA TACGTGCTGC GCGGCGATTC GCTCGGCTCG
GTAGACATCG GCTCGCCGGT CTACTACCGC CGCGTCCAGG TCGGCCAAGT GGTCGGCTTC
TCGCTCGACA AGGACGGCAC GGGCGTCACG TTCAACGTGT TCGTCAATGC GCCGTACGAC
CAGTACGTCG GCATGAATAC GCGCTGGTGG CAGGCGAGCG GCGTCGATCT GCGGCTCGAT
TCGAGCGGTC TGAAGCTGAA CACGCAGTCG CTCGCGACCG TGATCCTCGG CGGCATCGCG
TTCCAGACGC CGCCGAACCA GGGCAGCGGC ACGACCGCGC CGAACAACAC GACGTTCCGC
CTCGGCTCCG ACGAGGGCGA CGCGATGCGC GACCCGGACG GCCAGCCGCT GCAGGTCGTG
ATGAACTTCA ACCAGTCGCT GCGCGGGCTC GCCGTCGGCG CGCCGGTCGA CTTCCGCGGC
ATCGTGCTCG GCGAAGTGAC GAACATCGGC ATCGACTTCG ATCCGAAGAC GAAGAACTTC
CTGATGCCGG TGACGATCAA CGTGTATCCG GAACGCCTCG GCCGCCGCTT CCGCGAAACG
ATCGAAAGCA AGGGCGAACC GGCGCGCCGC GAGATCGTCG AGCGGCTCGT CCAGCACGGG
CTGCGCGGCC AGCTGCGCAC CGGCAACCTG CTGACGAGCC AGCTGTACGT CGCGCTCGAC
TTCTTCCCGA AGGCGCCGCC CGTGAAGATC GATACCGCGC ACCTGCCGTT CGAGCTGCCA
ACCGTGCCGA ACACGCTCGA CGAGCTGCAG CTGCAGGTCG CCGACATCGC GAAGAAGCTC
GACAAGGTGC CGTTCGACCA GATCGGCGCG AACCTGAACA GCGCGCTCGC GAACGCCGAC
AAGCTGTTCA AGCAACTCGA CACGCAGGTC GCGCCGGAAG CACGCGACAC GCTGTCGGCC
GCGAAGCAGA CTTTCTCGAC CGCCGAGGCG ACGCTGCAGC AGGATTCGCC GCTGCAATCC
GACGTGCGCG GCGCGCTGAA GGAGCTCACG CGCACGCTGC AATCGCTGAA CGCGCTCGCC
GACTATCTGG AGCGCCACCC CGAATCGCTG CTCAAGGGCA AGCCAGGAGA TAAACAATGA
|
|---|
| Protein sequence | MNSPQGPQHD APRPPDPAIS TKSGWLPSLV WLVPLIAALI GIGLVIKSVR ERGPEITISF
HSAEGLEPGK TQVKYKDVEI GTVKTIKLSK DLSRVLVQVQ LKKEAEDFAV QGSRFWIVRP
RVGATGVSGL GTLLSGAYIG VDAGHGQDTL TDFTGLETPP AVTGDQKGTQ YVLRGDSLGS
VDIGSPVYYR RVQVGQVVGF SLDKDGTGVT FNVFVNAPYD QYVGMNTRWW QASGVDLRLD
SSGLKLNTQS LATVILGGIA FQTPPNQGSG TTAPNNTTFR LGSDEGDAMR DPDGQPLQVV
MNFNQSLRGL AVGAPVDFRG IVLGEVTNIG IDFDPKTKNF LMPVTINVYP ERLGRRFRET
IESKGEPARR EIVERLVQHG LRGQLRTGNL LTSQLYVALD FFPKAPPVKI DTAHLPFELP
TVPNTLDELQ LQVADIAKKL DKVPFDQIGA NLNSALANAD KLFKQLDTQV APEARDTLSA
AKQTFSTAEA TLQQDSPLQS DVRGALKELT RTLQSLNALA DYLERHPESL LKGKPGDKQ
|
|---|
| |