| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0665 |
|---|
| Symbol | mnmA |
|---|
| ID | 6122346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 730185 |
|---|
| End bp | 731360 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637228 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_001763965 |
|---|
| Protein GI | 170732018 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC GCCGTGTAGT AGTGGGCATG TCGGGCGGCG TCGATTCGTC GGTGACCGCG
TGGCTGCTGA AGGAACAGGG CTACGACGTG GTCGGCCTGT TCATGAAGAA CTGGGAAGAC
GACGACGACG GCGAGTACTG CTCGACGCGC CAGGACTGGA TCGACGTCGT GTCGGTGGCC
GACCTGATCG GCATCGACGT GGAAGCCGTC AACTTCGCCG CGGAATACAA GGACCGCGTA
TTCGCCGAGT TCCTGCGCGA ATACTCGGCC GGCCGCACGC CGAACCCGGA CGTGCTGTGC
AACGCCGAGA TCAAGTTCAA GGCGTTCCTC GACCACGCGA TGTCGCTCGA CGCGGAAATG
ATCGCGACCG GCCACTATGC GCGCGTGCGC GAACGCGACG GGCGTTTCGA ACTGCTGAAG
GCTTTCGATC ATACGAAAGA CCAGTCGTAC TTCCTGCACC GGCTGAACCA GGCGCAACTG
TCGAAGACGA TGTTCCCGCT CGGCGAGATC CCGAAGACGA AGGTGCGCGA GATCGCCGCG
CAGATCGGGC TGCCGAACGC GAAGAAGAAG GATTCGACCG GCATCTGCTT CATCGGCGAA
CGGCCGTTCC GCGATTTCCT GAATCGCTAT CTGCCGACGA AACCCGGCCC GATGAAGACG
CCCGACGGCA AGGTGGTCGG CGAGCACATC GGCCTCGCGT TCTACACGTT CGGCCAGCGC
AAGGGCATCG GCCTCGGCGG CAGCAAGGAT GGCAACGGCG ACCCGTGGTT CGTCGCCGCG
AAGGACATCG CGTCGAACAC GCTGTACGTC GTGCAGGGCC ACGATCATCC GTGGCTGCTG
TCGCGCGAGC TCGTCGCCGG CAACGTGAGC TGGGTCGCCG GCGAGCCGCC GGCGGACGGC
TTCGCGTGCG GCGCGAAGAC GCGCTACCGG CAGGCCGATG CGGCGTGCGT GTTCGGTGGG
GCCGCGACAG GCGCCGCGGC TGCCGGCCCG GCAGGCGAAG CGCGCTTCTC GCTCGCGTTC
GACGACGCGC AATGGGCCGT CACGCCCGGC CAGTCGGCCG TGCTGTACGA CGGCGAGATC
TGCCTCGGCG GCGGCATCAT CGAATCCGCG GCCACCGGCC AGCCCGGTCA GGCCACGTCG
GCGGGCCACG CGCCGGCACT CGCCGAAGCA CGCTGA
|
|---|
| Protein sequence | MSKRRVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDGEYCSTR QDWIDVVSVA
DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLDAEM
IATGHYARVR ERDGRFELLK AFDHTKDQSY FLHRLNQAQL SKTMFPLGEI PKTKVREIAA
QIGLPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPMKT PDGKVVGEHI GLAFYTFGQR
KGIGLGGSKD GNGDPWFVAA KDIASNTLYV VQGHDHPWLL SRELVAGNVS WVAGEPPADG
FACGAKTRYR QADAACVFGG AATGAAAAGP AGEARFSLAF DDAQWAVTPG QSAVLYDGEI
CLGGGIIESA ATGQPGQATS AGHAPALAEA R
|
|---|
| |