| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0640 |
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| Symbol | |
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| ID | 6122321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 700754 |
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| End bp | 706045 |
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| Gene Length | 5292 bp |
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| Protein Length | 1763 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641637203 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001763940 |
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| Protein GI | 170731993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCACT CATTTCGATC GATATGGAGC GAGGCCACCG GCTGCTGGGT CGCGGTCGCG
GAAACGACCC GGGCACGCGG CAAGCGCTCG GGCGCTGCAT CGGGGCCAAG TCAGCGCACC
GCCCGCAAGG CAACGCATCA CGCAACGCGC CCGTCGCCGC TTCGCGTCAT GGCGCTCGGC
GCCGCCCTGG CGGCACTGTC GGCCGGCACC GTGCACGCAT CGACCTGCGG CAACGGCACG
GCCGTCGCGA ACGGCGCCAC CTGCGCGCTC GGCAGTTTCA GCCCGACCGT CAACAACGAT
CTCGTCGGCG CCACGACCGT GTCGGACGGC GACCGGGTCG GCCTGACCGG CGCCTGGACG
GGCGCGACCG GCGACATGGG CTACACGTTG ACGCCGCTCG GCAGCGCCTC CGTGGTATCG
GGCAACCCCA ACCAGCCGCT GCTGTCGATC GGCGGCAAGA CGCAAAGCGT CAGCACGCCC
GACTCGATCA CTGGCAGCCA TGCGTCGGTC GCGACCTACG ATTCGGGCGC GTTCGCCGCA
TCGAGCGCCG GCTCGACCAA CGTGCCGGTC TATCACGACG TGAACGGCAA CCAGTACGTG
AACACGCGGA TCGGCACCGT CGAGCGCTCC GGCGGCACGC TCGACGTGTC GATCGGCGAT
CCGGCGGGCG CGCCGACGGC GGCCGGCAAC GCGATCACGA TGGCCCCGAA GCAGACCGAC
CTGTTCGTCG CGGACGGCAC GGGCACGGCG CAAAGCGTCA TCAACTGGAA CTCGCGCAAC
CAGATCTGGC TCGGCACCGG CGACTATCTC GCGAGCGGCG GCCCCGTCAG CCACGTGCTG
CTCGACGTGC CGGCGTATAC CGGCACCTTC ACGGCCTTCG ACGGCAGCAC GTGGACGGTC
ACCGACGCCG CGTCGCTCGC CGCGTACAAC ACCTTTCTCG TGCGCTCGGT TCAGAGCGGC
GCGCTCGGCT CGCAGGCCGC CTACGACCAC GCGTTCAGCC AGGCCGTCAC GTTCTCCACG
CAATCGTTCG AGTATGCGAA CAACGTGTCG CCAGGCGACA AGAACACGCT GCAAATGGAC
TACCTGACGG TCATGCACGG CACGGGCGCA AACGCAACGC TGCATATCGG CAAGGACGGC
CAGATCGACT TCCGCGGCAC CAACACGATC GACTCGAGCT CGGCGGTCCT CGCGGAAAAC
GGCGCGCACT TCGTCAACGA CGGGCGGCTG TCGGGCGACT TCACGCTCGT GCGCCTGCTG
ACCGGCGCGA GCGGCGTGAA TAACGGCGTG ATCTCGTCGG GCTACGCAGC CGGCGACAAC
TTCAATACGG GCGGCGCCGC GTTGCCCTAC AACTTCAGTC TCAACGCGTA CACCGAGGGC
AGCGGCATCT ATGCGAACGG CGCCGGCACG ACGTTCGTCA ACAACGGCGT GATGAACGTC
GGCGCCTGGA ATCTCACCCG CAACCGGCTC GACCTGCAGA ACTACGCGGT AGCCGCCACG
GACGGCGCGC GCGCGTCGAA CGCCGGCACG ATCAACGTCG GCGTCAACGC GACGACGCTC
GACAGCCAGG TGATCGGCGG CCTCGTCGCC GGCGGCAGCT TCACGAACGA AGCCGGCGGC
ACGATCTATC TCGGCCGCAC CGCGCAGTAC GACCCCAGCT CTCCCGAAGC CGCGAACGAC
GTCGCGCTGT CCGCGCACGG GTACGGCATC CTGCTCGGCG CGTCGGGCAC CGCCAGCAAC
CTCGGCACGA TCGTGATCGG CACGCAAACG CAGAACGGCG CCGCACTGGC GAGCATCGGG
TCGACTTCCG GCACGCTGAC CAACGCGGGC GCGATCGTCG TCAACGGCGC CGCGCCGGGC
ACGCCGCTCG CCAACGTCGG CATGCTCGCG GCCGACACCG CCGCGACCGT GACCAATACG
GGCACGATCA CGCTGAACGG CGTGAACGGC ATCGGCATCA TGGTCGTCGG CACCGGCACG
AACGCGACGG CCGCGACGTC GACCGGCACG ATCAACGTCG CCGGCGGGCT CGATCCCGCG
TCGGGCACGC GCAACTACGG CGTCTGGGCC GAAGGGCCGC TCGCGAAAGC CACGCTCGAC
GGTGCGCTGA ACCTAGCGGG CACCGGCGCG ATCGGCGTGC ATGCGCGTTC GGGCGCGACG
ATCGACGTCG GCGCGAACGC CGTGCCGGCC TTCATGTCCG GCACGCACCA GATCGGCTTC
TATGCATACG GCGCAGGCTC GCAAATCAAC GTCGCTGCGC AGCACCTGAG TGTCGACACC
GACGATTCGA CGCTGTTCCG CGTCGCGGGC GGCGCGGCCT ACACGGGCGC GTCGGCGGCC
GGCGCACTGA TCACCGACGT CAACGGCCAG CGCGCGCGCG GCGTGCTCGC GACCGACGCC
GGCACCACGC TGTCGACCGG CAATGCGATC TACGACGTCA ACGGCGCGAA CGGCATCGCG
ATCGCGGTCG AAGGCGGCGC GAAAGGCACG ATCGACCCGG GCACGACGAT CAACCTGAAC
GCGGCCGGCG CGACCGCGGG CATCGTCGAC GGTCAGGCGC ACGACCTCGC CGGCGCGGCT
GCCGGCGCAC CGGTCGCGAC GACGCTGACC AATCACGCCG CCGTCACGTC GTCGACCGCC
GGCGTGACCG GCTTCATCGC GCAGAACCTC GGCACGCTCG AGAACCGCAG CACGGTGTTG
CTGACTGGCG CCGGCTCGAC GGGCGTCGTG GCCGGCACGC TCGGCACGGT GAACAACGCG
TCGACGATCC GCGTCTCCGA CGGCACCGGC GCGCTCGTGC AGGGTGCGTC GGCCACGCTC
GCCAATGCGG GTTCGATCGA AGCCGACGAT GGGATCGCGG GCGTGCGTCT CACGGGAGCC
GGCGCATCGG TCGCGCTGTC GGGCGCGGGC ACCGTCGTCG CGAACGGCAG CGCCGACGGC
GTGCTGATCG ACTCGACCGT CAGCGGCGGC GGCATCGCGG CCGGCCCGAC ATCGATCGCG
GTCGGCGGCT CGGGCAGCGG CATCCGCAAC CTCGGTGCGA ATGCAACGAT CGCACTGTCC
GGCACGCAGG TCGCCACGAC CGGCAACGGC GCCGCCGGCC TCGCGTCGAC CGGTGCGGGT
GCGCGTATCG CGACCGATGC GGCCACGGTC GTCCGCACGG CGGGAACCGA CGCGCTCGGC
CTGTCCGTGT CGGGGGCCGA CTCCACACTC ACGGCCAACG GAACGACCGT CGCGACGACC
GGCGCGAACG CGCATGCGAT CGTCATGGAC GGCGGCGCGA CAGCCCTGCT GTCGGGCGCG
AAGATTTCCG CATCGGGTGC CGCGGCCGAT GGCATCGTCG CGCAAAACGG CGGCCGCATC
GCCGATACGG GTTCGTCGCT CGCCAGCGTG GCCGGCAACG GCGCCACCGC GAACAGCGGC
GGCGTGCTCG CGTTGACCGG CACGGCGCTC ACCGGCGCGA CGGCCGGCGT GCTGACGTCG
GACACGCTCG CGAACGGCGC GACCAGCTCG GTGCTCGTCG ACGGCGGCAG CGTGACGTCC
GCCACCGGGC CGGCGTTCGC CGCGCGCGGC GGCACGGCCG ACGTCGCGGT ACGCAACGGC
ACGGTCGTGA CGGCCGGCAA CGGCACGCTG CTGAACCTCG CGAACGGCAG CAACGTGACG
TTCAGCGCAT CGGCGGTCAA CCTCGCGGGC GACATCGTGT CGGACGCATC GAGCACCGGC
AACGTGCTCC TCGCGAACGG CACGACGCTG ACCGGGAAGA TCGACCCGGT CGCGCTGAGT
GTCGACGGCA CGAGCACGTG GCGCATGACG GGCAGTTCGG TCCTGAGCAG CCTGAACAAC
GCGGGCCTCG TCGCATTCGC CGCGCCGACC GGCTCGCCGA CGCTGACCGG CAGCTACAAG
ACGCTGACGA CCGGCGGCTA CGTCGGCAAC GGCGGCACGC TCGCGCTGAA CACGTATCTC
GGCGCCGATA CGTCACCGAC CGACCGGCTG ATCGTGAACG GCGGCACGGC GAGCGGCACG
ACCGGCCTGA AGATCGCCAA CACGGCCGGC ACCGGCGCGC AGACGACCGG CGACGGCATT
CCCGTGGTCG TCACGGCCAA CGGCGGCACG ACCGCCGCGT CGGCATTCCA TCTTGCCGGC
CCGGTACAGG CCGGCGCGTA TGAATACCGG CTCTATCGCG GCGGGCAAGG CGATGCGAAC
GGCTGGTACC TGCGCTCGCA ACTCGACCAG ACCGACCCCG GCGACCCGAT CCACCCGTCC
GGCGGCGGCG ACGGCGGCAA CAACGGGAAT GGCAACGCAA ACGGCAACGG CGGCACGCTC
GCGTATCGTC CGGGCGTCTC CGGCTACGCG ATGACGCCGC TGCTGAACGC CGACTACGGC
TTCTCGACGC TCGGCAGACT GCACGAGCGC GTCGGCGACA TCTACAACGT CGAGCAACAG
CAGCCCGGCA ATCGCGATGG CGTGTGGGGG CGCATCGGCG GCCAGAGCCT CGATGCGAAT
GCGGGCCGTT TCTCGGCCGA CGAACGCACG TTCTTCGCGC AGTTCGGCAA GGACTGGACC
CTCGACCAGG CGCCGGACGG CGCCGGCAGC ACGCACGTGG GCGTGACGGC CAGCATCGGC
GTGTCGAACG CGAGCTTCAG CGACATGGCG CGCGCAGGCT CGCCCGACCT GTCGACGTCG
ACCGGCTCGG TCGAGATGCA CGCGCAAAGC GTCGGCGGCT ACTGGACGCG CTATCTGCCC
GACGGCACCT ACTTCGACAG CGTCGGGCAG GTCACGCACT ACGGCAACCG CTATCGCGAC
AGCTACGGCA ACGAGGCGTC GCAGAACGGC TTCGGCGTCG CGCTGTCGCA GGAAGTCGGC
AAACCGTTCG CGATCGGCAC GTTGCCGGTC GCGGTCGAGC CGCAAGCGCA GTTGATGTAT
CAGTACCTGA AGCTGAACGG GTTCAACGAC AACGTGTCGG CCGTGTCGGG CACGACGACG
AATGCGCTGC GCGGCCGCGT CGGCGTGCGC ATCTTCCGGC CGAACCTCCA GTCGGATGCG
GGCGGCGGCG CCGCGACGCC GTACTTCACG GCCGACGTGC TGCACGACTT CCTGTCGCCG
GGGCAGACCG TGGTCGGCGG CACGCCGTTC GCGACGCATC TCGGGCGCAC CTGGTACGAG
CTCGGCGTCG GCGTGACCGC CGGCTTCGGC AAGTCGGGAG AGCTGTACGC GAATGCGAAG
ATCGCGCGCA ACATCGGCGG CGATTACCGG CGCGGGATCG TCGGGCAGGT CGGCTACCGG
TACAGCTGGT AA
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| Protein sequence | MNHSFRSIWS EATGCWVAVA ETTRARGKRS GAASGPSQRT ARKATHHATR PSPLRVMALG
AALAALSAGT VHASTCGNGT AVANGATCAL GSFSPTVNND LVGATTVSDG DRVGLTGAWT
GATGDMGYTL TPLGSASVVS GNPNQPLLSI GGKTQSVSTP DSITGSHASV ATYDSGAFAA
SSAGSTNVPV YHDVNGNQYV NTRIGTVERS GGTLDVSIGD PAGAPTAAGN AITMAPKQTD
LFVADGTGTA QSVINWNSRN QIWLGTGDYL ASGGPVSHVL LDVPAYTGTF TAFDGSTWTV
TDAASLAAYN TFLVRSVQSG ALGSQAAYDH AFSQAVTFST QSFEYANNVS PGDKNTLQMD
YLTVMHGTGA NATLHIGKDG QIDFRGTNTI DSSSAVLAEN GAHFVNDGRL SGDFTLVRLL
TGASGVNNGV ISSGYAAGDN FNTGGAALPY NFSLNAYTEG SGIYANGAGT TFVNNGVMNV
GAWNLTRNRL DLQNYAVAAT DGARASNAGT INVGVNATTL DSQVIGGLVA GGSFTNEAGG
TIYLGRTAQY DPSSPEAAND VALSAHGYGI LLGASGTASN LGTIVIGTQT QNGAALASIG
STSGTLTNAG AIVVNGAAPG TPLANVGMLA ADTAATVTNT GTITLNGVNG IGIMVVGTGT
NATAATSTGT INVAGGLDPA SGTRNYGVWA EGPLAKATLD GALNLAGTGA IGVHARSGAT
IDVGANAVPA FMSGTHQIGF YAYGAGSQIN VAAQHLSVDT DDSTLFRVAG GAAYTGASAA
GALITDVNGQ RARGVLATDA GTTLSTGNAI YDVNGANGIA IAVEGGAKGT IDPGTTINLN
AAGATAGIVD GQAHDLAGAA AGAPVATTLT NHAAVTSSTA GVTGFIAQNL GTLENRSTVL
LTGAGSTGVV AGTLGTVNNA STIRVSDGTG ALVQGASATL ANAGSIEADD GIAGVRLTGA
GASVALSGAG TVVANGSADG VLIDSTVSGG GIAAGPTSIA VGGSGSGIRN LGANATIALS
GTQVATTGNG AAGLASTGAG ARIATDAATV VRTAGTDALG LSVSGADSTL TANGTTVATT
GANAHAIVMD GGATALLSGA KISASGAAAD GIVAQNGGRI ADTGSSLASV AGNGATANSG
GVLALTGTAL TGATAGVLTS DTLANGATSS VLVDGGSVTS ATGPAFAARG GTADVAVRNG
TVVTAGNGTL LNLANGSNVT FSASAVNLAG DIVSDASSTG NVLLANGTTL TGKIDPVALS
VDGTSTWRMT GSSVLSSLNN AGLVAFAAPT GSPTLTGSYK TLTTGGYVGN GGTLALNTYL
GADTSPTDRL IVNGGTASGT TGLKIANTAG TGAQTTGDGI PVVVTANGGT TAASAFHLAG
PVQAGAYEYR LYRGGQGDAN GWYLRSQLDQ TDPGDPIHPS GGGDGGNNGN GNANGNGGTL
AYRPGVSGYA MTPLLNADYG FSTLGRLHER VGDIYNVEQQ QPGNRDGVWG RIGGQSLDAN
AGRFSADERT FFAQFGKDWT LDQAPDGAGS THVGVTASIG VSNASFSDMA RAGSPDLSTS
TGSVEMHAQS VGGYWTRYLP DGTYFDSVGQ VTHYGNRYRD SYGNEASQNG FGVALSQEVG
KPFAIGTLPV AVEPQAQLMY QYLKLNGFND NVSAVSGTTT NALRGRVGVR IFRPNLQSDA
GGGAATPYFT ADVLHDFLSP GQTVVGGTPF ATHLGRTWYE LGVGVTAGFG KSGELYANAK
IARNIGGDYR RGIVGQVGYR YSW
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