| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0638 |
|---|
| Symbol | |
|---|
| ID | 6122319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 699272 |
|---|
| End bp | 699949 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641637201 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001763938 |
|---|
| Protein GI | 170731991 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAGT TCGACTGGAG TAGTATTCCC GGCGCGCTGC CGACGCTGTG GTCGGGGGCG
GTCGTCACGT TCAAGATCAC GCTGATCGCG ATCGTGATCG GGATCGTCTG GGGCACGCTG
CTGGCGCTGC TGCGGCTGTC CGGCGTGAAG CCGCTCGCAT GGTTCGCGAA AGCGTACGTG
ACGGTGTTCC GCTCGATCCC GCTCGTGATG GTGCTGCTGT GGTTCTTCCT GATCGTGCCG
CAGTTGCTGC AGGGCGTGCT CGGGCTGTCG CCGACGATCG ACATCCGCCT CGCGTCGGCC
ATGGTCGCGT TCTCGTTGTT CGAAGCCGCG TATTATTCCG AGATCATCCG CGCCGGCATC
CAGGCGGTGC CGCGCGGGCA GGTGAACGCC GCGTTCGCGC TCGGCATGAA CTACGCGCAG
GCGATGCGCC TCGTGATCCT GCCGCAGGCG TTCCGCGCGA TGGTGCCGCT GCTGCTCACG
CAGGCGATCG TCCTGTTCCA GGATACGTCG CTCGTGTACG TGATCAGTCT CGCGGACTTC
TTCCGCACGG CCGCCAACGT CGGCGATCGC GACGGCACGA CCGTCGAGAT GGTCCTGTTC
GCCGGCGCAT GCTATTTCGT GATTTGCTCG TTGGCGTCTG CTCTCGTCAA GGGTCTCCAG
AAAAAGGTCA CAAGATGA
|
|---|
| Protein sequence | MHQFDWSSIP GALPTLWSGA VVTFKITLIA IVIGIVWGTL LALLRLSGVK PLAWFAKAYV
TVFRSIPLVM VLLWFFLIVP QLLQGVLGLS PTIDIRLASA MVAFSLFEAA YYSEIIRAGI
QAVPRGQVNA AFALGMNYAQ AMRLVILPQA FRAMVPLLLT QAIVLFQDTS LVYVISLADF
FRTAANVGDR DGTTVEMVLF AGACYFVICS LASALVKGLQ KKVTR
|
|---|
| |