| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0608 |
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| Symbol | |
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| ID | 6122289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 666411 |
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| End bp | 667184 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641637171 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001763908 |
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| Protein GI | 170731961 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.600374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATG CGCTTGACCG ATTCCGCCTC GACGGCCGCC GCGCGCTGAT TACCGGTTCC
GGCCGCGGGA TCGGGCTGAC GCTCGCCCGC GGGCTCGCGG AAGCGGGCGC GGCGATCGTC
ATCAACGATC GCAATGAAGA GAAGGCCGCG ACGCTCGCGC GCCAGTTCCG CGACGAAGGC
TTCGCGGCCG ACCATGCGGT GTTCGACGTG GCCGAGCACG CGCAGGTACG TGCGGCGATC
GACGACTTCG AGACACGCGT CGGCGCGATC GACATCCTCG TGAACAACGC GGGCATCCAG
CGCCGCGCGC CGCTCGACGC TTTCGACCCG GACGACTGGC ATGCACTGAT GCGCGTGAAT
CTCGACGGCG TGTTCAACGT CGCGCAGGCC GTCGCGCGGC ACATGATCGC GCGCGGCCAC
GGCAAGATCA TCAACATCTG CTCGGTGCAG AGCGAACTCG CGCGGCCGAC GATCGCGCCG
TATGCGGCGA CCAAGGGCGC GGTGCGGATG CTGACCAAAG GGATGTGCGC CGACTGGGCG
CGCCACGGCA TCCAGGCGAA CGGCCTCGCA CCCGGCTATT TCGAAACCGA ACTGAATCGC
GCGCTGGTCG ACGACGCGGC GTTTTCGGAC TGGCTGTGCA AGCGCACGCC GGCCGGTCGT
TGGGGGCAGG TCGACGAGCT GTGCGGCGCG GCGATCTTCC TCGCGTCGGC CGCGTCCGAT
TTCGTAAACG GCCAGACGCT GTTCGTCGAC GGCGGGCTGA CCAGTGCCGT CTAA
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| Protein sequence | MTHALDRFRL DGRRALITGS GRGIGLTLAR GLAEAGAAIV INDRNEEKAA TLARQFRDEG
FAADHAVFDV AEHAQVRAAI DDFETRVGAI DILVNNAGIQ RRAPLDAFDP DDWHALMRVN
LDGVFNVAQA VARHMIARGH GKIINICSVQ SELARPTIAP YAATKGAVRM LTKGMCADWA
RHGIQANGLA PGYFETELNR ALVDDAAFSD WLCKRTPAGR WGQVDELCGA AIFLASAASD
FVNGQTLFVD GGLTSAV
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