Gene Bcenmc03_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0606 
Symbol 
ID6122287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand+ 
Start bp664280 
End bp665290 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID641637169 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001763906 
Protein GI170731959 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.236936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GCGTCGCAAT CAACGGCTAC GGCCGTATCG GCCGCAACAC GCTGCGCGCG 
TTCTATGAAA ACGGCAAGAA GCACGATCTC GAGATCGTCG CGATCAACGA CCTGGGCGAT 
GCGAAGACCA ACGCGCACCT GACCCAGTAC GACACCGCGC ACGGCAAGTT CCCGGGCGAA 
GTGTCGGTCG ACGGCGACTA CCTCGTCGTG AACGGCGACA AGATCCGCGT GCTGGCGAAC 
CGCAACCCGG CCGAACTGCC GTGGGGCGAG CTGGGCGTCG ACGTCGTGAT GGAATGCACG 
GGCTTCTTCA CGACGAAGGA AAAGGCGAGC GCGCACCTGA AGGGCGGCGC GAAGAAGGTG 
ATCATCTCGG CGCCGGGCGG CAAGGACGTC GACGCGACGA TCGTCTACGG CGTGAACCAC 
GACGTGCTGA AGGCCGAGCA CACGGTCATC TCGAACGCAT CGTGCACGAC GAACTGCCTC 
GCGCCGCTCG TCAAGCCGCT GAACGACAAG ATCGGCCTCG AAACCGGTCT GATGACGACG 
ATCCACGCGT ACACGAACGA CCAGGTGCTG ACGGACGTCT ATCACGAAGA CCTGCGCCGC 
GCGCGTTCGG CCACCCACAG CCAGATCCCG ACGAAGACGG GCGCCGCATC GGCCGTCGGC 
CTCGTGCTGC CGGAACTGAA CGGCAAGCTC GACGGTTACG CGATCCGCGT CCCGACGATC 
AACGTGTCGA TCGTCGACCT GTCGTTCATC GCGAAGCGCG ACACGACGGT CGAGGAAGTC 
AACGCGATCA TGAAGGAAGC ATCGGAAGGC GCGCTGAAGG GCATCCTCGG CTACAACGAC 
GCACCGCTGG TGTCGATCGA CTTCAACCAC AACCCGGCTT CGTCGACGTT CGACGCGACG 
CTGACCAAGG TGTCGGGCCG CCTCGTGAAG GTGTCGAGCT GGTACGACAA CGAGTGGGGT 
TTCTCGAACC GCATGCTGGA TACGGCAATC GCATTCGCGA ACGCGAAGTA A
 
Protein sequence
MTIRVAINGY GRIGRNTLRA FYENGKKHDL EIVAINDLGD AKTNAHLTQY DTAHGKFPGE 
VSVDGDYLVV NGDKIRVLAN RNPAELPWGE LGVDVVMECT GFFTTKEKAS AHLKGGAKKV 
IISAPGGKDV DATIVYGVNH DVLKAEHTVI SNASCTTNCL APLVKPLNDK IGLETGLMTT 
IHAYTNDQVL TDVYHEDLRR ARSATHSQIP TKTGAASAVG LVLPELNGKL DGYAIRVPTI 
NVSIVDLSFI AKRDTTVEEV NAIMKEASEG ALKGILGYND APLVSIDFNH NPASSTFDAT 
LTKVSGRLVK VSSWYDNEWG FSNRMLDTAI AFANAK