| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0605 |
|---|
| Symbol | |
|---|
| ID | 6122286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 662120 |
|---|
| End bp | 664192 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637168 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_001763905 |
|---|
| Protein GI | 170731958 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0697832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGT GCCCCCGTTT CCTCGACTCG TTCTCCGGAC TCGACATGAC GACTTCGTCT
CCCGCCTCCA CCACCCTGAT GGCCAACGCG ATCCGTGCGC TCGCGATGGA CGCCGTCCAG
CAAGCGAACT CCGGCCACCC CGGCATGCCG ATGGGCATGG CCGAAATCGG CGTCGCACTC
TGGTCGCGCC ATCTGAAGCA CAACCCGACG AACCCGCACT GGGCCGACCG CGACCGTTTC
GTGCTGTCGA ACGGCCATGG CTCGATGCTG CTGTACTCGC TGCTGCACCT GACCGGCTAC
GACCTGCCGA TCGAAGAGCT GAAGAATTTC CGCCAGCTGC ACTCGAAGAC GCCGGGCCAC
CCCGAATACG GGATCACGCC GGGCGTCGAG ACGACCACCG GCCCGCTCGG CCAGGGTCTC
GCGAACGCGG TCGGCATGGC GCTCGGCGAA GCGCTGATGG CCGACGAGTT CAATCGTGAC
GGCGCGAAGA TCGTCGATCA CCACACGTAC GTGTTCCTCG GCGACGGCTG CCTGATGGAA
GGCATTTCGC ACGAAGCCTG CTCGCTCGCG GGCACGCTGA AGCTGAACAA GCTGATCGCG
CTGTACGACG ACAACGGCAT CTCGATCGAC GGCGACGTCG TCAACTGGTT CCACGACGAC
ACGCCGAAGC GCTTCGAAGC GTACGGCTGG AACGTGATCC CGAACGTGAA CGGCCACGAC
GTCGACGCGG TCGACGCGGC CATCGCGAAG GCGAAGCTGT CGGACAAGCC GACGCTGATC
TGCTGCAAGA CGGTGATCGG CAAGGGCGCG GCCACCAAGG CCGGCGGCCA CGACGTGCAC
GGCGCGGCGC TCGGCGCGGA AGAAATCGCG AAGACGCGCG AAGCGCTCGG CTGGAAGTGG
GAGCCGTTCG TGATTCCGCA GGAAGTCTAC GCGGCCTGGG ATGCGAAGGA GGCCGGCAAG
CGCGCCGAGT CGGAGTGGGA CGCGACGTTC GCCGCGTATC GCGCGAAGTT CCCGGCAGAA
GCCGCCGAAT TCGAGCGCCG GATGGCCAAC AAGCTGCCGG CCGACTGGGC CGAGAAGGCT
GCGGCGATCA TCGCCGGCGC GAACGAGCGC GCCGAGACGG TCGCGACCCG CAAGGCGTCG
CAGCAGGCGA TCGAGGGCCT CGCCGCCGCG CTGCCGGAGC TGCTCGGCGG CTCGGCCGAC
CTGACCGGCT CGAACCTGAC CAACTGGAAG GCGTCGAAGG CGGTGCGCGC GAATCCGGAA
GGCGCGGGCG TGCTGCTCGG CAACCACATC AACTACGGCG TGCGCGAATT CGGCATGAGC
GCGGCGATCA ACGGTCTCGC GCTGCACGGC GGCCACAAGC CGTTCGGCGG CACGTTCCTG
ACGTTCTCCG ACTACAGCCG CAACGCGCTG CGCGTGGCCG CGCTGATGAA GGTGCCGTCG
ATCTTCGTGT TCACGCACGA TTCGATCGGC CTCGGCGAAG ACGGCCCGAC GCACCAGTCG
ATCGAGCACG TGTCGAGCCT GCGCCTGATC CCGAACCACG ACGTGTGGCG TCCGGCCGAC
ACGGTCGAGA CGGCCGTCGC GTGGACCCAC GCGGTCGCCG CGGATCGTCC GTCGAGCCTG
ATCTTCAGCC GCCAGAACCT CGCGTTCAAC CCGCGTACCG ATGCGCAGAT CGCCAACATC
GAGAAGGGCG GTTACGTGCT GAAGGACTGG GACGAAGAGA TCGTTGCACG CAAGATCATC
CTGATCGCGA CGGGCTCGGA AGTCGAACTC GCGATGAAGG CCGTCGAGCC GCTCGCGCAG
CAGGGCATCG CGGCGCGCGT CGTGTCGATG CCGTCGACCA ACGTGTTCGA CCGCCAGGAC
GCCGAATATC GCGAACGCGT GCTGCCGCAC GGCGTGCGCC GCGTCGCGAT CGAAGCGGGC
GTGACGAGCT TCTGGCACAA GTACGTTGGC CTCGAAGGCG GCGTCGTCGG GATCGACACG
TTCGGTGAGT CGGCGCCGGC CGGCGTGCTG TTCAAGTACT TCGGCTTCAC CGTCGAGCAC
GTCGTCGAGA CGGCCAAGGC CGTGCTGGCC TAA
|
|---|
| Protein sequence | MPPCPRFLDS FSGLDMTTSS PASTTLMANA IRALAMDAVQ QANSGHPGMP MGMAEIGVAL
WSRHLKHNPT NPHWADRDRF VLSNGHGSML LYSLLHLTGY DLPIEELKNF RQLHSKTPGH
PEYGITPGVE TTTGPLGQGL ANAVGMALGE ALMADEFNRD GAKIVDHHTY VFLGDGCLME
GISHEACSLA GTLKLNKLIA LYDDNGISID GDVVNWFHDD TPKRFEAYGW NVIPNVNGHD
VDAVDAAIAK AKLSDKPTLI CCKTVIGKGA ATKAGGHDVH GAALGAEEIA KTREALGWKW
EPFVIPQEVY AAWDAKEAGK RAESEWDATF AAYRAKFPAE AAEFERRMAN KLPADWAEKA
AAIIAGANER AETVATRKAS QQAIEGLAAA LPELLGGSAD LTGSNLTNWK ASKAVRANPE
GAGVLLGNHI NYGVREFGMS AAINGLALHG GHKPFGGTFL TFSDYSRNAL RVAALMKVPS
IFVFTHDSIG LGEDGPTHQS IEHVSSLRLI PNHDVWRPAD TVETAVAWTH AVAADRPSSL
IFSRQNLAFN PRTDAQIANI EKGGYVLKDW DEEIVARKII LIATGSEVEL AMKAVEPLAQ
QGIAARVVSM PSTNVFDRQD AEYRERVLPH GVRRVAIEAG VTSFWHKYVG LEGGVVGIDT
FGESAPAGVL FKYFGFTVEH VVETAKAVLA
|
|---|
| |