Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0604 |
Symbol | |
ID | 6122285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 661047 |
End bp | 661904 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641637167 |
Product | spermidine synthase |
Protein accession | YP_001763904 |
Protein GI | 170731957 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.990769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCA CCCTTCTCTT TCACCCGACG CCCGACGCCA CCTACGGCTT CCCGAACGCG CGGCGGCTCG CGCACGTCGC GTCCCCGCAC CAGCAGATCG AAGTCTGGGA AACCCCGCAG CTCGGCCGGC TGTTCACGCT GGACGGCCGG CCGATGACGT CGGTCGGCGA CGAATTCGTC TATCACGAGT GCATGACGCA CCCGGCCGCG CTCGCGCATC CGGCGCCGAG GAAGGCGCTC GTGCTCGGCG GCGGCGACGG CGGCGCGGCG CGCCAGCTGC TCAAGCACGC GTGCATCGAA CGGATCGTGA TCGCCGAACT CGACGACGAG GTGGTCGGGA TGGCGCGCCG CTATCTCGAC GACGTGCACC AGGGCGCGCT CGACGACCCG CGCGTCGAGG TCGTGATCGG CGACGCCGCG CACTTCGTCG ATTCGACGAT CGAACATTTC GATCTCGTCG TGTTCGACCT CACGCCGCCC GATTCGCCGG CGGCCGGCCT CTATACGCGC GCGTTCTACG CGCGGCTCAA GCGGATTCTC ACGCGCTGCG GCGCGATCTC GATGCATCTC GGCTCGCCGG TGTTCCATGC CGCACGCATC GCCGCGCTGC TCGACGACCT GCGCGCGAGC TTCGCAGTCG TCGATCCGCT GTCCGCGCAC GTGCCGCTGT ACGGCTCGCA GTGGCTGATG GCGATCGCGA GCGACACGCT CGATGCGGCC GCGCTGTTCG CGCACGACGT CGACGCACGG CTCGCGGCCC GCCGCGTCGA CGGTCTGCGC TACTACGATG CGCGGCTGCA TGCGTCCCTC TTTGCCCTGC CGCGCGCGCT GCGCGATACA CTGGGCGTTC GCCGCTGA
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Protein sequence | MSTTLLFHPT PDATYGFPNA RRLAHVASPH QQIEVWETPQ LGRLFTLDGR PMTSVGDEFV YHECMTHPAA LAHPAPRKAL VLGGGDGGAA RQLLKHACIE RIVIAELDDE VVGMARRYLD DVHQGALDDP RVEVVIGDAA HFVDSTIEHF DLVVFDLTPP DSPAAGLYTR AFYARLKRIL TRCGAISMHL GSPVFHAARI AALLDDLRAS FAVVDPLSAH VPLYGSQWLM AIASDTLDAA ALFAHDVDAR LAARRVDGLR YYDARLHASL FALPRALRDT LGVRR
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