Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0563 |
Symbol | |
ID | 6122244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 618292 |
End bp | 618882 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641637126 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_001763863 |
Protein GI | 170731916 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.170025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00054835 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACG CGGCGGTGTT GTCGGTCGAC GCGAACGGCT GGGTGCGCGA AGCGCGCCAT GCGCCGTCGC CGAACTTCGA GGCGCGGCCC GCGGGGGCGG TGCCGACACT CGTGATCGTT CACAACATCA GCCTGCCGCC CGGCGAATTC GGTGGCGACG CGATCGAGGC GCTGTTCCTG AATCGCCTCG ACTGCGATGC GCACCCCTAT TACGAGAGCC ACCTGCGCGG CGTGCGCGTG TCCGCCCATT TCCTGATCCG CCGCGGCGGC GAACTCGTGC AGTTCGTGTC GTGCGACGAG CGCGCGTGGC ATGCGGGCTC GTCCGAGTTC TTCGGCCGCA CGCGCTGCAA CGACTTCTCG ATCGGCATCG AGCTCGAGGG CGCGGACGAC GTGCCGTTCG ACGATGCCCA ATACGCGGTG CTCGCCGCGC TCTCCCGCGC GCTCGCCGCG CGCTACCCGG TCGACGCGTT CGCGGGGCAC TCGGACGTCG CGCCGGGCCG CAAGACCGAC CCGGGCCCGC ATTTCGATTG GCAACGCTTC GCGAGCGATG CCGGTTTTTC CGCCGAATAC TTTCCTTTCC GTCAGCACTG A
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Protein sequence | MSDAAVLSVD ANGWVREARH APSPNFEARP AGAVPTLVIV HNISLPPGEF GGDAIEALFL NRLDCDAHPY YESHLRGVRV SAHFLIRRGG ELVQFVSCDE RAWHAGSSEF FGRTRCNDFS IGIELEGADD VPFDDAQYAV LAALSRALAA RYPVDAFAGH SDVAPGRKTD PGPHFDWQRF ASDAGFSAEY FPFRQH
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