| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0560 |
|---|
| Symbol | |
|---|
| ID | 6122241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 615610 |
|---|
| End bp | 616977 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637123 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_001763860 |
|---|
| Protein GI | 170731913 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.276011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000299171 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA ATCTCACTCA ACGGATGGCG CGCGTCGTCA AGACGCTGCG CGGCGAGGCC
CGGCTCACCG AGGCGAACAC GCAGGAGATG CTCCGCGAGG TGCGTCTCGC GCTGCTGGAA
GCCGACGTGT CGCTGCCGGT CGTCCGCGAA TTCATCGCCA AGGTCAAGGA AAAGGCGCTC
GGCGAAGAAG TGATCAGCAG CCTGTCGCCG GGCCAGGCGC TCGTCGGCGT GGTCCAGAAG
GAACTGACCG CCGTGATCGG CGGTGACTAC GAAGGCAAGG CCGCCGAGCT GAACCTCGCG
GTCACGCCGC CCGCCGTGAT CCTGATGGCC GGCCTGCAGG GCGCCGGCAA GACCACGACC
GTCGGCAAGC TCGCGAAGCT GCTGCGCGAG AAGTACAAGA AGAAGGTGCT GACCGTGTCG
TGCGACGTGT ATCGCCCGGC GGCGATCATG CAGCTGAAAA CGGTGACCGA GCAGGTCGGC
GCCGACTTCT TCCCGTCCAC GCCGGACCAG AAGCCCGTCG ACATCGCGCT CGCCGCCGTC
GACTGGGCGA AGCGCCACTA CCATGACGTG CTGCTCGTCG ACACGGCCGG CCGCCTCGGC
ATCGACGAGG CGATGATGCA GGAAATCGCC GCGCTGCACG GCACGCTGAA GCCGGCCGAA
ACGCTGTTCG TCGTCGACGC GATGCTCGGC CAGGACGCGG TCAACACCGC GAAGGCGTTC
AACGACACGC TGCCGCTCAC CGGCGTCGTG CTGACCAAGC TCGACGGCGA CTCGCGCGGC
GGCGCCGCGC TGTCGGTGCG CCACATCACG GGCAAGCCGA TCAAGTTCGT CGGCGTCGCC
GAGAAGCTCG ACGGCCTCGA GGTGTTCCAC CCCGACCGGA TGGCGAACCG GATCCTCGGC
ATGGGCGACA TCCTCGCGCT CGTCGAGGAA GCGCAGCGCG GCGTCGATGT CCAGGCCGCG
CAGAAGCTCG CCGACAAGGT CAAGAAAGGC GGCGATTTCG ACCTGAACGA TTTCCGCGCG
CAGATCTCGC AGATGAAGAA CATGGGCGGC CTGTCGTCGC TGATGGACAA ACTCCCCGCG
CAGTTCCAGC AGGCGGCGGC CGGCGCCGAC ATGGGCCAGG CCGAAAAGTC GATCCGCCGG
ATGGAAGGCA TCATCAGCTC GATGACGCCC GCCGAGCGCG CGAAACCCGA AATCATCAAG
GCGACGCGCA AGCGCCGCAT TGCAGCCGGC GCGGGCGTGC CGGTGCAGGA AGTCAACCGG
ATGCTGAACC AGTACGACCA GATGCGTACG ATGATGAAGA AGCTGAAGGG CGGCAACATG
CAGAAGATGA TGCGCGGCCT GAAGGGCATG ATGCCCGGCA TGCGCTGA
|
|---|
| Protein sequence | MLDNLTQRMA RVVKTLRGEA RLTEANTQEM LREVRLALLE ADVSLPVVRE FIAKVKEKAL
GEEVISSLSP GQALVGVVQK ELTAVIGGDY EGKAAELNLA VTPPAVILMA GLQGAGKTTT
VGKLAKLLRE KYKKKVLTVS CDVYRPAAIM QLKTVTEQVG ADFFPSTPDQ KPVDIALAAV
DWAKRHYHDV LLVDTAGRLG IDEAMMQEIA ALHGTLKPAE TLFVVDAMLG QDAVNTAKAF
NDTLPLTGVV LTKLDGDSRG GAALSVRHIT GKPIKFVGVA EKLDGLEVFH PDRMANRILG
MGDILALVEE AQRGVDVQAA QKLADKVKKG GDFDLNDFRA QISQMKNMGG LSSLMDKLPA
QFQQAAAGAD MGQAEKSIRR MEGIISSMTP AERAKPEIIK ATRKRRIAAG AGVPVQEVNR
MLNQYDQMRT MMKKLKGGNM QKMMRGLKGM MPGMR
|
|---|
| |