| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0547 |
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| Symbol | |
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| ID | 6122228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 602176 |
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| End bp | 603387 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641637109 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001763847 |
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| Protein GI | 170731900 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000171989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0556866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGC GCACGCCACC GCGCGAAACC CGCTTTGCAT GGCGCGGCCG CCGTCGCGAC
GGCTCACCGC GCCGCGGGAT CGTCATCGCC TTCGACGCCG CAGCCGCGCG CGCCACGCTC
GCGCGCGACG GCATCGCGGT ACTGTCGCTC GACGTCCGCG GGCCGGCCCG TCCGCCCGCG
GCGGCCGCGC GCGACATCAC ACGCTTCACG CGCCAGCTCG CGAGCCTGCT GCAGGCCGGC
CTGCTGCTCG CGCCGTCGCT CGAGATGCTC GCGCACACCC GCACGCGCGA CGGCGTGCCG
CGCATCGCCG CGGGGCTTGC CCGCGAGATC GTCGGCGGCC GGCGCTTCGC CGACGCGCTC
GCACGCTATC CATCGCAATT CGGCACGCTG TATCGCCAGT TGATCGAGGT CGGCGAGGCG
TCCGGTTCGC TCGGCATCGT GCTGACGCGG GTCGCGGAAC ACCGCGAACG CGCCGACGCG
CAATGGCGCA AGCTGCGTGC CGCACTCGCG TATCCGGCCG CCGTCATCCT GTTCGCGCTC
GCAATCTCGG CGGCATTGAT GGTGTGGGTC GTGCCGACCT TCCGGCAGAT CTTCGACGGC
TTCGGCGCCG CCCTGCCCGC GCCGACCCGC GCACTGCTCG CACTGTCCTC CGCGCTGTCG
GCATGGGGCG GCGTGCTCCT GGCCGGTGCG GCCACGATGG GGCTGGCCGC GCAGCACGCG
CTTCGGCGCT CGGCCGCGCT ACGCCATGCG CTCGCGCGGC GCTTGCTGCG CGCGCCGCTC
GCGGGCAGCG CGCTGGAACG GTTCGCGGCG GCACGCTGGT GCCGGTCGCT GGCGACCCTG
CTCGGCGCCG GCGTGCCGCT CGCCGATGCG TTCGCCACGC TCGAGCGCAC CGCCGGCCAT
CCGGTGTTCG CGCACGCCAC CGCGCACATC GCCGCACGCG TGCTGCGCGG CGTGCGTCTG
GCCGATGCGA TGCATTCGGC CGGCTGCTTT CCGGAAGACG TCGTGCAACC AATTGCCGTC
GCCGAGGAAA CCGGTGCGCT CGACACGATG CTCGCCGACA TCGCCGCACT GTGCGAACGC
CAGCTCGACG CGCGTCTCGA TACGCTCGCG GCACTGGGCG AACCGTTGAT CGTGATCGTC
CTGGGCGCGC TCGTCGGCGG CCTCGTGATC GCGATGTACC TGCCGATCCT TCAGCTCGGC
AACGTGGTGT AG
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| Protein sequence | MSMRTPPRET RFAWRGRRRD GSPRRGIVIA FDAAAARATL ARDGIAVLSL DVRGPARPPA
AAARDITRFT RQLASLLQAG LLLAPSLEML AHTRTRDGVP RIAAGLAREI VGGRRFADAL
ARYPSQFGTL YRQLIEVGEA SGSLGIVLTR VAEHRERADA QWRKLRAALA YPAAVILFAL
AISAALMVWV VPTFRQIFDG FGAALPAPTR ALLALSSALS AWGGVLLAGA ATMGLAAQHA
LRRSAALRHA LARRLLRAPL AGSALERFAA ARWCRSLATL LGAGVPLADA FATLERTAGH
PVFAHATAHI AARVLRGVRL ADAMHSAGCF PEDVVQPIAV AEETGALDTM LADIAALCER
QLDARLDTLA ALGEPLIVIV LGALVGGLVI AMYLPILQLG NVV
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