Gene Bcenmc03_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0542 
Symbol 
ID6122223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp599012 
End bp599455 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID641637104 
ProductNUDIX hydrolase 
Protein accessionYP_001763842 
Protein GI170731895 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.184867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.118986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG ATCTGGCACA GGGCGCCGTG CGGGCGCCGG ACGGCCGCAA GGTGACGGAA 
GTCGCGGTCG GCGTGATGGT GCAGCCGGAC GGGCGCTATC TGCTCGCGCA ACGCCTGCAG
GGCAAGCCGT ACGAAGGTTA CTGGGAGTTT CCGGGCGGCA AGCTGGAGGC CGGCGAAAGC
GTCGAGGACG CGCTGGCGCG CGAGCTGCAC GAGGAACTCG GCATCGAAGT CACGGCTAGC
CACCGCTGGC ACACGCTCGA GCACGATTAT CCGCACGCGT ACGTGCGGCT CTATTTCTGC
AAGGTGACGG GCTGGACGGG CGAGCCGCAC AGCAAGGAAG GGCAGGCGTT CGTATGGCAG
CAACTGCCGG TCGAGGTCGC GCCGCTGTTG CCGGCGGCGC TGCCGGTGCT CGAACTGCTC
GAGAAGGAAG CGGCGTCGCA ATGA
 
Protein sequence
MSADLAQGAV RAPDGRKVTE VAVGVMVQPD GRYLLAQRLQ GKPYEGYWEF PGGKLEAGES 
VEDALARELH EELGIEVTAS HRWHTLEHDY PHAYVRLYFC KVTGWTGEPH SKEGQAFVWQ
QLPVEVAPLL PAALPVLELL EKEAASQ