Gene Bcenmc03_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0540 
SymbolargJ 
ID6122221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp596885 
End bp598126 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content66% 
IMG OID641637102 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_001763840 
Protein GI170731893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.389835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.231302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA ATTTTCCGTC GATCGATCCC GCCCAACTGC ATCCCGTCGC CGGCGTCACG 
CTCGGCTGGG CGGAAGCGAA CATCCGCAAG CCGAATCGCA AGGACGTGCT GGTCATCTCC
GTCGACGAAG GCGCGACGGT CGCGGGCGTG TTCACCGAAA ACCGTTTCTG CGCGGCGCCG
GTCATCGTCT GCCGCGAGCA CCTGGCGAAG GTGCGTGCGG GCGGCGCGGG CATCCGTGCG
CTGGTCGTGA ATACGGGCAA TGCGAACGCG GGCACCGGCG AGCCAGGCCT CGTGAACGCC
CGTGAAACGT GTACGGAACT CGCGCGTCTC GCGGGCATCG AGCCGGCGCA GGTGCTGCCG
TTCTCGACCG GCGTGATCCT CGAGCCGCTG CCGATCGATC GTCTGAAGGC CGGTTTGCCG
GCTGCGCTCG CGAACCGCAA GGCCGCGAAC TGGTTCGACG CCGCGCAGGC GATCATGACG
ACCGACACGC TGCCGAAGGC GACGTCGCGC CAGGTGACGA TCGACGGCCA CACGGTCACG
CTGACGGGCA TCAGCAAGGG CGCGGGCATG ATCAAGCCGA ACATGGCGAC GATGCTCGGC
TTCCTCGCGT TCGATGCGAA CGTCGCGCAG CCGGTGCTCG ACACGCTCGT GAAGGAAGTC
GCCGACCGCT CGTTCAACTG CATCACGATC GACGGCGACA CGTCGACGAA CGACTCGTTC
ATCCTGATCG CATCGGGCAA GAGCACGCTG CCGGCGATCA CGTCGACCGA TTCGCCGGCC
TATGCGGCGC TGCGCGACGC GGTGACGGAA GTCGCGCAGG TGCTGTCGCA ACTGATCGTG
CGCGACGGCG AAGGCGCGAC GAAATTCATG ACGGTGCAGG TCGAAGGCGG CAAGAGCGTC
GCCGAATGCC GCCAGATCGC GTACGCGATC GGCCATTCGC CGCTCGTGAA GACGGCCTTC
TACGCATCCG ACCCCAACCT GGGCCGGATT CTCGCGGCGA TCGGCTATGC GGGCGTCGCG
GATCTCGACG TCGGCAAGAT CGACCTCTAT CTGGATGACG TGCTCGTCGC GAAGGCGGGC
GGCCGCAACC CGGCCTATCA GGAAGAGGAC GGCCAGCGCG TGATGAAGCA GAGCGAGATC
ACGATCCGCG TGCTGCTTGG CCGTGGCGAC GAGCAGGCCA CCGTCTGGAC GTGCGACCTG
TCGCACGATT ACGTGAGCAT CAACGCGGAT TACCGCTCCT GA
 
Protein sequence
MAVNFPSIDP AQLHPVAGVT LGWAEANIRK PNRKDVLVIS VDEGATVAGV FTENRFCAAP 
VIVCREHLAK VRAGGAGIRA LVVNTGNANA GTGEPGLVNA RETCTELARL AGIEPAQVLP
FSTGVILEPL PIDRLKAGLP AALANRKAAN WFDAAQAIMT TDTLPKATSR QVTIDGHTVT
LTGISKGAGM IKPNMATMLG FLAFDANVAQ PVLDTLVKEV ADRSFNCITI DGDTSTNDSF
ILIASGKSTL PAITSTDSPA YAALRDAVTE VAQVLSQLIV RDGEGATKFM TVQVEGGKSV
AECRQIAYAI GHSPLVKTAF YASDPNLGRI LAAIGYAGVA DLDVGKIDLY LDDVLVAKAG
GRNPAYQEED GQRVMKQSEI TIRVLLGRGD EQATVWTCDL SHDYVSINAD YRS