Gene Bcenmc03_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0528 
SymbolmurD 
ID6122209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp581696 
End bp583207 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content71% 
IMG OID641637090 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_001763828 
Protein GI170731881 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAG ATCGGCAACG GCCGATGGTG CTCGTACTGG GGCTCGGGGA ATCGGGTCTC 
GCGATCGCGC GATGGTGCGC GAGGCACGGG TGCCGGCTGC GCATTGCCGA TACCCGCGAG
GCGCCGCCGA ACCTTGCCGC GCTGCAGGCC GAAGGCATCG ATGCGGAATT CGTCGGCGGG
GCGTTCACGC CCGCGCTGCT CGACGGCGGC ATCGAGATCG TCGGGCTGAG CCCCGGGCTG
TCGCCGCTGG AGCCGGCGCT CGCGGCGCTG GTCGCGGCCG CGAACGAGCG CGGTGTCGCG
GTGTGGGGCG AGCTGGAATT CTTCGCGCAG GCGCTGCGCG CGCTCGGCAC GAGCGGCTAC
CAGCCGAAGG TGCTCGCGAT TACCGGCACC AACGGCAAGA CCACGACGAC GAGCCTCACG
GGCCTGCTGT GCCAGCGCTC GGGCAAGAAG GTCGCCGTCG CGGGCAACAT CAGCCCGGCG
ATGCTCGATC GGCTCGCGAG CGCGATCGAC GAAACCGCGC TGCCCGACGT ATGGGTGCTC
GAACTGTCGA GCTTCCAGCT CGAGACCGCG CGCACGTTCG CGCCCGATGC GGCCGCGATC
CTCAACATCA CGCAGGACCA CCTAGACTGG CACGGCAGCT TCGACGCATA CGCGCAGGCA
AAGGGCCTGA TCTTCGGCGC GACGACGACG CGCGTGCTGA ACCGCGACGA CGCGGCCGTG
ATGAAATTCG CGCCGGCAGC CGGCGCGGCC GACGCGCCGC GCACGGTCAC GTTCGGCCTG
AACGAACCGA CGCAGGACGG CGACTACGGG CTGTCGCGCG ACAACGGCAT CGCATGGCTG
GTGGAAGCCG TCGATCGCGA CGCGCCGGAT GAAGCGACGA CGACCCGCCG GCGCAAGCGC
GACGCCGCGC ATACGCCCGA CATCGCGCAA AAGCGCCTGA TGCCGGCCGA CGCGCTACGC
ATCCGCGGGC TGCACAACGC GGCGAACGCG CTGGCCGCGT TCGCGCTCGC GCGCGCGATC
GACCTTCCGG CCGCACCGTT GCTGCACGCG CTGCGCGAAT ACCGCGGCGA AGCGCATCGC
GTCGAAGTAA TCGCGACGAT CGACGACGTC GACTATGTGG ATGACAGCAA GGGCACGAAC
GTCGGCGCGA CGGTGGCCGC GCTCGACGGG CTCGCGCAGA AGATCGTGCT GATCGCGGGC
GGCGACGGCA AGGGGCAGGA TTTCGGGCCG CTGGTCGCGC CGGTCGCGCG CTGGTGCCGC
GCGGTGATGC TGATCGGGCG CGACGCGCCG GTGATCCGCG ACACGCTCGC CGAAACGGGC
GTGCCGCTCG CCGGCCACGC GACGCTCGAA GCAGCGGTGC ACGCAGCAGC CGAGCTCGCC
GAGCCGGGCG ATGCAGTGTT GCTGTCGCCT GCGTGCGCGA GCCTCGACAT GTTCAGGAAC
TACGCCCATC GCGCGGAAGT GTTCCGCGCG GCGGTCGACG CAATCGCCAT CGACAAAGGA
GCGACGCCAT GA
 
Protein sequence
MFGDRQRPMV LVLGLGESGL AIARWCARHG CRLRIADTRE APPNLAALQA EGIDAEFVGG 
AFTPALLDGG IEIVGLSPGL SPLEPALAAL VAAANERGVA VWGELEFFAQ ALRALGTSGY
QPKVLAITGT NGKTTTTSLT GLLCQRSGKK VAVAGNISPA MLDRLASAID ETALPDVWVL
ELSSFQLETA RTFAPDAAAI LNITQDHLDW HGSFDAYAQA KGLIFGATTT RVLNRDDAAV
MKFAPAAGAA DAPRTVTFGL NEPTQDGDYG LSRDNGIAWL VEAVDRDAPD EATTTRRRKR
DAAHTPDIAQ KRLMPADALR IRGLHNAANA LAAFALARAI DLPAAPLLHA LREYRGEAHR
VEVIATIDDV DYVDDSKGTN VGATVAALDG LAQKIVLIAG GDGKGQDFGP LVAPVARWCR
AVMLIGRDAP VIRDTLAETG VPLAGHATLE AAVHAAAELA EPGDAVLLSP ACASLDMFRN
YAHRAEVFRA AVDAIAIDKG ATP