| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0525 |
|---|
| Symbol | murE |
|---|
| ID | 6122206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 577531 |
|---|
| End bp | 579078 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641637087 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_001763825 |
|---|
| Protein GI | 170731878 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.995806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCCGCAGTTC CCATCCGGCG CATCAGCAGA TCGCAGCCGC GCTTGCGTGG
CTGCGTCAGC ATGTGGCCCC TACGGCGCAA CTGCATGCCG ACACGCGCAG CCTCGAGGCT
GGCGACGTGT TCGTCGCGTA TGCGGTCGAC GGGGCAGATA ACCGCGCTTT CATGGCGGAT
GCCGTTGCAC GCGGTGCGGC CGCCGTGCTG TATCAGCCGG AAGGGCTGGC CCACGCACCG
GCCGCGCCGG CCGTACCCGT CGCGCTGGCG GTGCCGGCGC TCGACCAGCT CGCCGGCGAG
ATCGCCAGCG GCTGGTACGG CGACCCGAGC GACAGCCTGC TGGCGATCGG TGTCACGGGC
ACGAACGGCA AGACGTCGTG CACGCAATGG ATCGCCACCG CACTGACGGC GCTGCACCAG
CCGTGCGCGG TGATCGGCAC GCTCGGCACC GGGATGCCCG GCCAGCTCGT GCCGAGCGGT
TTCACGACGC CCGACGCCCC GCAACTCCAG CGCAGCCTCG CGCAATTGCG CGACGCGGGC
GCGCAGGCGG TGGCGATGGA AGTGTCGTCG CATGCGCTGC ACCAGGGGCG CGCGAACGGG
ACGGCGTTCG ACGTCGCGGT GTTTACGAAC CTCACGCAGG ATCACCTCGA CTATCACGGC
ACGTTCGATG CGTATGAGGC CGCGAAGGCG AAGCTGTTCG CATGGCGCGG CCTGCGCGCG
GCGGTGATCA ACCGCGACGA TGCGGCTGGC CGCCGCCTGC TCGAGAAGCT GGCTGGCCGT
GTGCGCACGA TCGCGTACGG GATCGGCGAC GCACCGGCGC CTGACGCCGA TCGGGAACTG
GTCGCGCTCG ACGTGCGCGC CACCGTGACG GGTACCGCAT TCCGCCTGCG TTCGTCGTGG
GGCGACGCAG ACGTCGAGGT CGGCACGCTC GGCACGTTCA ACGTCAGCAA CCTGCTCGCG
GTGCTCGGCG CGCTGCTCGC GGCCGACGTG CCGTTCGACG CGGCCCTTGC CGAGATCGAG
CGGCTCGAGT CGGTCAACGG CCGGATGCAG CGGCTCGGCG GCCGGCTGCA GAACGACGAA
CCGCTCGTCG TGATCGACTA CGCGCATACG CCAGACGCGC TCGAAAAGAC GCTCGACGCG
CTGCGCCCGA TCGCCGCGGC GCGCGGCGGC CGGCTCGTCT GCATGTTCGG CTGCGGCGGC
GACCGCGATG CGACGAAGCG TCCGCTGATG GGCGCGATCG CGGAGCGGCT CGCCGACGAA
GTCGTCGTCA CGAGCGACAA CCCGCGCAGC GAAGATCCGC AGCACATCAT CGACCAGGTC
GTCGCGGGCA TGACTGCGCC CGATCGCGCG CGCCGTATCG AGGATCGCGC GAGCGCGATC
CTGCAGGCCG TACGCGGCGC CGCACGCGAG GATGTCGTCG TGCTGGCCGG CAAGGGCCAC
GAGGCCACAC AGGAAATCAT GGGCAAGAAG CGCGCGTTCT CCGACCAGGA TCACGCACGG
CTCGCGCTCG CAGCGCGCGC GACGCACGGC AAGGGAGGCG CCGAATGA
|
|---|
| Protein sequence | MSAARSSHPA HQQIAAALAW LRQHVAPTAQ LHADTRSLEA GDVFVAYAVD GADNRAFMAD
AVARGAAAVL YQPEGLAHAP AAPAVPVALA VPALDQLAGE IASGWYGDPS DSLLAIGVTG
TNGKTSCTQW IATALTALHQ PCAVIGTLGT GMPGQLVPSG FTTPDAPQLQ RSLAQLRDAG
AQAVAMEVSS HALHQGRANG TAFDVAVFTN LTQDHLDYHG TFDAYEAAKA KLFAWRGLRA
AVINRDDAAG RRLLEKLAGR VRTIAYGIGD APAPDADREL VALDVRATVT GTAFRLRSSW
GDADVEVGTL GTFNVSNLLA VLGALLAADV PFDAALAEIE RLESVNGRMQ RLGGRLQNDE
PLVVIDYAHT PDALEKTLDA LRPIAAARGG RLVCMFGCGG DRDATKRPLM GAIAERLADE
VVVTSDNPRS EDPQHIIDQV VAGMTAPDRA RRIEDRASAI LQAVRGAARE DVVVLAGKGH
EATQEIMGKK RAFSDQDHAR LALAARATHG KGGAE
|
|---|
| |