| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0514 |
|---|
| Symbol | |
|---|
| ID | 6122195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 557245 |
|---|
| End bp | 558447 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641637071 |
|---|
| Product | beta-ketoadipyl CoA thiolase |
|---|
| Protein accession | YP_001763814 |
|---|
| Protein GI | 170731867 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.107177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.646425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACG CCTACATCTG CGATGCGATT CGCACCCCCA TCGGCCGCTA CGGCGGCGCC
CTGAAAGATG TCCGTGCCGA CGACCTCGGT GCGGTGCCGC TCAAGGCGCT GATCGAGCGC
AATCGCGACG TCGACTGGGC GGCGATCGAC GACGTGATCT ACGGCTGCGC GAATCAGGCC
GGCGAGGACA ACCGCAACGT CGCGCGCATG TCGGCGCTGC TGGCGGGCCT GCCTACTGCC
GTGCCGGGCA CGACGCTGAA CCGGCTGTGC GGTTCCGGCA TGGACGCGGT CGGCACGGCT
GCGCGCGCGA TCAAGGCAGG TGAAGCGCGC CTGATGATTG CAGGCGGCGT CGAGAGCATG
ACGCGCGCGC CGTTCGTGAT GGGCAAGGCC GCAAGCGCGT TCGCTCGCCA GGCCGACATC
TTCGACACGA CGATCGGCTG GCGCTTCGTC AATCCGCTGA TGAAACAGTT GTACGGCGTC
GATTCGATGC CGGAGACGGC CGAGAACGTC GCGGTCGACT ACGACATCAG CCGCGCGGAT
CAGGACCTGT TCGCGCTGCG CAGCCAGCAG AAGGCCGCGC GGGCGCAGCA GGACGGCACG
CTCGCTGAAG AAATCGTCGC GGTCACGATT CCGCAGAAGA AAGGCGATGC CATCGTCGTG
TCGCGTGACG AGCATCCGCG CGAAACGTCG CTCGAAGCGC TCGCGAAACT GAAGGGCGTC
GTGCGCCCGG ACGGCTCGGT AACCGCCGGC AACGCGTCGG GCGTGAACGA CGGCGCCTGC
GCGCTGCTGC TCGCCAATGC GCAGGCGGCC GACCAGTATG GCCTGCGCCG CCGCGCGCGC
GTCGTCGGCA TGGCGACCGC CGGCGTCGAG CCGCGCGTGA TGGGCATCGG CCCCGCGCCG
GCCACGCAGA AACTGCTGCG CCAGCTCGAC ATGCGCATCG ACCAGTTCGA CGTGATCGAA
CTGAACGAGG CATTCGCGTC GCAAGGGCTC GCCGTGCTGC GCATGCTCGG CGTCGCCGAC
GACGATCCGC GCGTGAACCC GAACGGCGGC GCGATCGCGC TCGGCCACCC GCTCGGTGCA
TCGGGCGCGC GGCTCGTTAC CACCGCGCTC CATCAACTCG AGCGTACCGG CGGCCGCTTC
GCGCTCTGTA CGATGTGCAT CGGCGTCGGC CAGGGCATCG CGATCGCGAT CGAACGCGTG
TAA
|
|---|
| Protein sequence | MTDAYICDAI RTPIGRYGGA LKDVRADDLG AVPLKALIER NRDVDWAAID DVIYGCANQA
GEDNRNVARM SALLAGLPTA VPGTTLNRLC GSGMDAVGTA ARAIKAGEAR LMIAGGVESM
TRAPFVMGKA ASAFARQADI FDTTIGWRFV NPLMKQLYGV DSMPETAENV AVDYDISRAD
QDLFALRSQQ KAARAQQDGT LAEEIVAVTI PQKKGDAIVV SRDEHPRETS LEALAKLKGV
VRPDGSVTAG NASGVNDGAC ALLLANAQAA DQYGLRRRAR VVGMATAGVE PRVMGIGPAP
ATQKLLRQLD MRIDQFDVIE LNEAFASQGL AVLRMLGVAD DDPRVNPNGG AIALGHPLGA
SGARLVTTAL HQLERTGGRF ALCTMCIGVG QGIAIAIERV
|
|---|
| |